Cargando…
Taxonomic and functional characterization of a microbial community from a volcanic englacial ecosystem in Deception Island, Antarctica
Glaciers are populated by a large number of microorganisms including bacteria, archaea and microeukaryotes. Several factors such as solar radiation, nutrient availability and water content greatly determine the diversity and abundance of these microbial populations, the type of metabolism and the bi...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6704131/ https://www.ncbi.nlm.nih.gov/pubmed/31434915 http://dx.doi.org/10.1038/s41598-019-47994-9 |
_version_ | 1783445444867653632 |
---|---|
author | Martinez-Alonso, Emma Pena-Perez, Sonia Serrano, Sandra Garcia-Lopez, Eva Alcazar, Alberto Cid, Cristina |
author_facet | Martinez-Alonso, Emma Pena-Perez, Sonia Serrano, Sandra Garcia-Lopez, Eva Alcazar, Alberto Cid, Cristina |
author_sort | Martinez-Alonso, Emma |
collection | PubMed |
description | Glaciers are populated by a large number of microorganisms including bacteria, archaea and microeukaryotes. Several factors such as solar radiation, nutrient availability and water content greatly determine the diversity and abundance of these microbial populations, the type of metabolism and the biogeochemical cycles. Three ecosystems can be differentiated in glaciers: supraglacial, subglacial and englacial ecosystems. Firstly, the supraglacial ecosystem, sunlit and oxygenated, is predominantly populated by photoautotrophic microorganisms. Secondly, the subglacial ecosystem contains a majority of chemoautotrophs that are fed on the mineral salts of the rocks and basal soil. Lastly, the englacial ecosystem is the least studied and the one that contains the smallest number of microorganisms. However, these unknown englacial microorganisms establish a food web and appear to have an active metabolism. In order to study their metabolic potentials, samples of englacial ice were taken from an Antarctic glacier. Microorganisms were analyzed by a polyphasic approach that combines a set of -omic techniques: 16S rRNA sequencing, culturomics and metaproteomics. This combination provides key information about diversity and functions of microbial populations, especially in rare habitats. Several whole essential proteins and enzymes related to metabolism and energy production, recombination and translation were found that demonstrate the existence of cellular activity at subzero temperatures. In this way it is shown that the englacial microorganisms are not quiescent, but that they maintain an active metabolism and play an important role in the glacial microbial community. |
format | Online Article Text |
id | pubmed-6704131 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-67041312019-08-23 Taxonomic and functional characterization of a microbial community from a volcanic englacial ecosystem in Deception Island, Antarctica Martinez-Alonso, Emma Pena-Perez, Sonia Serrano, Sandra Garcia-Lopez, Eva Alcazar, Alberto Cid, Cristina Sci Rep Article Glaciers are populated by a large number of microorganisms including bacteria, archaea and microeukaryotes. Several factors such as solar radiation, nutrient availability and water content greatly determine the diversity and abundance of these microbial populations, the type of metabolism and the biogeochemical cycles. Three ecosystems can be differentiated in glaciers: supraglacial, subglacial and englacial ecosystems. Firstly, the supraglacial ecosystem, sunlit and oxygenated, is predominantly populated by photoautotrophic microorganisms. Secondly, the subglacial ecosystem contains a majority of chemoautotrophs that are fed on the mineral salts of the rocks and basal soil. Lastly, the englacial ecosystem is the least studied and the one that contains the smallest number of microorganisms. However, these unknown englacial microorganisms establish a food web and appear to have an active metabolism. In order to study their metabolic potentials, samples of englacial ice were taken from an Antarctic glacier. Microorganisms were analyzed by a polyphasic approach that combines a set of -omic techniques: 16S rRNA sequencing, culturomics and metaproteomics. This combination provides key information about diversity and functions of microbial populations, especially in rare habitats. Several whole essential proteins and enzymes related to metabolism and energy production, recombination and translation were found that demonstrate the existence of cellular activity at subzero temperatures. In this way it is shown that the englacial microorganisms are not quiescent, but that they maintain an active metabolism and play an important role in the glacial microbial community. Nature Publishing Group UK 2019-08-21 /pmc/articles/PMC6704131/ /pubmed/31434915 http://dx.doi.org/10.1038/s41598-019-47994-9 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Martinez-Alonso, Emma Pena-Perez, Sonia Serrano, Sandra Garcia-Lopez, Eva Alcazar, Alberto Cid, Cristina Taxonomic and functional characterization of a microbial community from a volcanic englacial ecosystem in Deception Island, Antarctica |
title | Taxonomic and functional characterization of a microbial community from a volcanic englacial ecosystem in Deception Island, Antarctica |
title_full | Taxonomic and functional characterization of a microbial community from a volcanic englacial ecosystem in Deception Island, Antarctica |
title_fullStr | Taxonomic and functional characterization of a microbial community from a volcanic englacial ecosystem in Deception Island, Antarctica |
title_full_unstemmed | Taxonomic and functional characterization of a microbial community from a volcanic englacial ecosystem in Deception Island, Antarctica |
title_short | Taxonomic and functional characterization of a microbial community from a volcanic englacial ecosystem in Deception Island, Antarctica |
title_sort | taxonomic and functional characterization of a microbial community from a volcanic englacial ecosystem in deception island, antarctica |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6704131/ https://www.ncbi.nlm.nih.gov/pubmed/31434915 http://dx.doi.org/10.1038/s41598-019-47994-9 |
work_keys_str_mv | AT martinezalonsoemma taxonomicandfunctionalcharacterizationofamicrobialcommunityfromavolcanicenglacialecosystemindeceptionislandantarctica AT penaperezsonia taxonomicandfunctionalcharacterizationofamicrobialcommunityfromavolcanicenglacialecosystemindeceptionislandantarctica AT serranosandra taxonomicandfunctionalcharacterizationofamicrobialcommunityfromavolcanicenglacialecosystemindeceptionislandantarctica AT garcialopezeva taxonomicandfunctionalcharacterizationofamicrobialcommunityfromavolcanicenglacialecosystemindeceptionislandantarctica AT alcazaralberto taxonomicandfunctionalcharacterizationofamicrobialcommunityfromavolcanicenglacialecosystemindeceptionislandantarctica AT cidcristina taxonomicandfunctionalcharacterizationofamicrobialcommunityfromavolcanicenglacialecosystemindeceptionislandantarctica |