Cargando…

Genome-wide identification of histone methylation (H3K9(me2)) and acetylation (H4K12(ac)) marks in two ecotypes of switchgrass (Panicum virgatum L.)

BACKGROUND: Histone modifications play a significant role in the regulation of transcription and various biological processes, such as development and regeneration. Though a few genomic (including DNA methylation patterns) and transcriptomic studies are currently available in switchgrass, the genome...

Descripción completa

Detalles Bibliográficos
Autores principales:	Ayyappan, Vasudevan, Sripathi, Venkateswara R., Kalavacharla, Venu ( Kal), Saha, Malay C., Thimmapuram, Jyothi, Bhide, Ketaki P., Fiedler, Elizabeth
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2019
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6704705/ https://www.ncbi.nlm.nih.gov/pubmed/31438854 http://dx.doi.org/10.1186/s12864-019-6038-x

Ejemplares similares

Analyses of methylomes of upland and lowland switchgrass (Panicum virgatum) ecotypes using MeDIP-seq and BS-seq
por: Dworkin, Mollee, et al.
Publicado: (2017)

Comparative transcriptome profiling of upland (VS16) and lowland (AP13) ecotypes of switchgrass
por: Ayyappan, Vasudevan, et al.
Publicado: (2016)

Global analysis of switchgrass (Panicum virgatum L.) transcriptomes in response to interactive effects of drought and heat stresses
por: Hayford, Rita K., et al.
Publicado: (2022)

Genome-Wide Profiling of Histone Modifications (H3K9(me2) and H4K12(ac)) and Gene Expression in Rust (Uromyces appendiculatus) Inoculated Common Bean (Phaseolus vulgaris L.)
por: Ayyappan, Vasudevan, et al.
Publicado: (2015)

Ecotypic and genotypic effects on regrowth and heading date in switchgrass (Panicum virgatum)
por: Jiang, Qingzhen, et al.
Publicado: (2019)

The Genetic Basis of Upland/Lowland Ecotype Divergence in Switchgrass (Panicum virgatum)
por: Milano, Elizabeth R., et al.
Publicado: (2016)

The Genetic Architecture of Nitrogen Use Efficiency in Switchgrass (Panicum virgatum L.)
por: Shrestha, Vivek, et al.
Publicado: (2022)

Comparative analysis of the root transcriptomes of cultivated sweetpotato (Ipomoea batatas [L.] Lam) and its wild ancestor (Ipomoea trifida [Kunth] G. Don)
por: Ponniah, Sathish K., et al.
Publicado: (2017)

Synergistic and Antagonistic Effects of Salinity and pH on Germination in Switchgrass (Panicum virgatum L.)
por: Liu, Yuan, et al.
Publicado: (2014)

Improved node culture methods for rapid vegetative propagation of switchgrass (Panicum virgatum L.)
por: Wang, Yongqin, et al.
Publicado: (2021)

Gene regulatory networks for lignin biosynthesis in switchgrass (Panicum virgatum)
por: Rao, Xiaolan, et al.
Publicado: (2018)

The genetic basis for panicle trait variation in switchgrass (Panicum virgatum)
por: Zhang, Li, et al.
Publicado: (2022)

Interactions among rooting traits for deep water and nitrogen uptake in upland and lowland ecotypes of switchgrass (Panicum virgatum L.)
por: Griffiths, Marcus, et al.
Publicado: (2021)

Anti-fungal bioactive terpenoids in the bioenergy crop switchgrass (Panicum virgatum) may contribute to ecotype-specific microbiome composition
por: Li, Xingxing, et al.
Publicado: (2023)

Transcriptomic analysis reveals vacuolar Na(+) (K(+))/H(+) antiporter gene contributing to growth, development, and defense in switchgrass (Panicum virgatum L.)
por: Huang, Yanhua, et al.
Publicado: (2018)

Transcriptome analysis of heat stress response in switchgrass (Panicum virgatum L.)
por: Li, Yong-Fang, et al.
Publicado: (2013)

Global changes in mineral transporters in tetraploid switchgrasses (Panicum virgatum L.)
por: Palmer, Nathan A., et al.
Publicado: (2014)

SNP Discovery with EST and NextGen Sequencing in Switchgrass (Panicum virgatum L.)
por: Ersoz, Elhan S., et al.
Publicado: (2012)

Physiological Evaluation of Alkali-Salt Tolerance of Thirty Switchgrass (Panicum virgatum) Lines
por: Hu, Guofu, et al.
Publicado: (2015)

Genome-Wide Analysis of the TCP Gene Family in Switchgrass (Panicum virgatum L.)
por: Huo, Yuzhu, et al.
Publicado: (2019)

Identification of microRNAs responsive to arbuscular mycorrhizal fungi in Panicum virgatum (switchgrass)
por: Johnson, Alex C., et al.
Publicado: (2022)

Five Nuclear Loci Resolve the Polyploid History of Switchgrass (Panicum virgatum L.) and Relatives
por: Triplett, Jimmy K., et al.
Publicado: (2012)

Enhanced characteristics of genetically modified switchgrass (Panicum virgatum L.) for high biofuel production
por: Shen, Hui, et al.
Publicado: (2013)

Accelerating the Switchgrass (Panicum virgatum L.) Breeding Cycle Using Genomic Selection Approaches
por: Lipka, Alexander E., et al.
Publicado: (2014)

Accuracy of Genomic Prediction in Switchgrass (Panicum virgatum L.) Improved by Accounting for Linkage Disequilibrium
por: Ramstein, Guillaume P., et al.
Publicado: (2016)

Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)
por: Zhang, Chao, et al.
Publicado: (2018)

Long non-coding RNAs of switchgrass (Panicum virgatum L.) in multiple dehydration stresses
por: Zhang, Chao, et al.
Publicado: (2018)

Targeted mutagenesis in tetraploid switchgrass (Panicum virgatum L.) using CRISPR/Cas9
por: Liu, Yang, et al.
Publicado: (2017)

Foxtail mosaic virus-induced gene silencing (VIGS) in switchgrass (Panicum virgatum L.)
por: Tiedge, Kira, et al.
Publicado: (2022)

A high-throughput transient gene expression system for switchgrass (Panicum virgatum L.) seedlings
por: Chen, Xinlu, et al.
Publicado: (2010)

Integrating transcriptional, metabolomic, and physiological responses to drought stress and recovery in switchgrass (Panicum virgatum L.)
por: Meyer, Eli, et al.
Publicado: (2014)

Development of a rapid, low-cost protoplast transfection system for switchgrass (Panicum virgatum L.)
por: Burris, Kellie P., et al.
Publicado: (2015)

Assessment of drought tolerance of 49 switchgrass (Panicum virgatum) genotypes using physiological and morphological parameters
por: Liu, Yiming, et al.
Publicado: (2015)

Antioxidant metabolism variation associated with alkali-salt tolerance in thirty switchgrass (Panicum virgatum) lines
por: Hu, Guofu, et al.
Publicado: (2018)

Natural variation in genes potentially involved in plant architecture and adaptation in switchgrass (Panicum virgatum L.)
por: Bahri, Bochra A., et al.
Publicado: (2018)

Associative nitrogen fixation (ANF) in switchgrass (Panicum virgatum) across a nitrogen input gradient
por: Roley, Sarah S., et al.
Publicado: (2018)

Overexpression of a rice BAHD acyltransferase gene in switchgrass (Panicum virgatum L.) enhances saccharification
por: Li, Guotian, et al.
Publicado: (2018)

Nitrogen remobilization and conservation, and underlying senescence‐associated gene expression in the perennial switchgrass Panicum virgatum
por: Yang, Jiading, et al.
Publicado: (2016)

Comparative transcriptome analysis provides key insights into seedling development in switchgrass (Panicum virgatum L.)
por: Zhang, Shumeng, et al.
Publicado: (2019)

Greenbug (Schizaphis graminum) herbivory significantly impacts protein and phosphorylation abundance in switchgrass (Panicum virgatum)
por: Zogli, Prince, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_173oohr20rdci0gpvd0adisphh