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Twelve quick tips for designing sound dynamical models for bioprocesses

Because of the inherent complexity of bioprocesses, mathematical models are more and more used for process design, control, optimization, etc. These models are generally based on a set of biochemical reactions. Model equations are then derived from mass balance, coupled with empirical kinetics. Biol...

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Detalles Bibliográficos
Autores principales: Mairet, Francis, Bernard, Olivier
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6705754/
https://www.ncbi.nlm.nih.gov/pubmed/31437146
http://dx.doi.org/10.1371/journal.pcbi.1007222
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author Mairet, Francis
Bernard, Olivier
author_facet Mairet, Francis
Bernard, Olivier
author_sort Mairet, Francis
collection PubMed
description Because of the inherent complexity of bioprocesses, mathematical models are more and more used for process design, control, optimization, etc. These models are generally based on a set of biochemical reactions. Model equations are then derived from mass balance, coupled with empirical kinetics. Biological models are nonlinear and represent processes, which by essence are dynamic and adaptive. The temptation to embed most of the biology is high, with the risk that calibration would not be significant anymore. The most important task for a modeler is thus to ensure a balance between model complexity and ease of use. Since a model should be tailored to the objectives, which will depend on applications and environment, a universal model representing any possible situation is probably not the best option.
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spelling pubmed-67057542019-09-04 Twelve quick tips for designing sound dynamical models for bioprocesses Mairet, Francis Bernard, Olivier PLoS Comput Biol Education Because of the inherent complexity of bioprocesses, mathematical models are more and more used for process design, control, optimization, etc. These models are generally based on a set of biochemical reactions. Model equations are then derived from mass balance, coupled with empirical kinetics. Biological models are nonlinear and represent processes, which by essence are dynamic and adaptive. The temptation to embed most of the biology is high, with the risk that calibration would not be significant anymore. The most important task for a modeler is thus to ensure a balance between model complexity and ease of use. Since a model should be tailored to the objectives, which will depend on applications and environment, a universal model representing any possible situation is probably not the best option. Public Library of Science 2019-08-22 /pmc/articles/PMC6705754/ /pubmed/31437146 http://dx.doi.org/10.1371/journal.pcbi.1007222 Text en © 2019 Mairet, Bernard http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Education
Mairet, Francis
Bernard, Olivier
Twelve quick tips for designing sound dynamical models for bioprocesses
title Twelve quick tips for designing sound dynamical models for bioprocesses
title_full Twelve quick tips for designing sound dynamical models for bioprocesses
title_fullStr Twelve quick tips for designing sound dynamical models for bioprocesses
title_full_unstemmed Twelve quick tips for designing sound dynamical models for bioprocesses
title_short Twelve quick tips for designing sound dynamical models for bioprocesses
title_sort twelve quick tips for designing sound dynamical models for bioprocesses
topic Education
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6705754/
https://www.ncbi.nlm.nih.gov/pubmed/31437146
http://dx.doi.org/10.1371/journal.pcbi.1007222
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