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Evaluation of TGFBI corneal dystrophy and molecular diagnostic testing

To date, 70 different TGFBI mutations that cause epithelial-stromal corneal dystrophies have been described. At present one commercially available test examines for the five most common of these mutations: R124H, R124C, R124L, R555W, and R555Q. To expand the capability of identifying the causative m...

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Autores principales: Chao-Shern, Connie, DeDionisio, Lawrence A., Jang, Jun-Heok, Chan, Clara C., Thompson, Vance, Christie, Kathleen, Nesbit, M. Andrew, McMullen, C. B. Tara
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6707296/
https://www.ncbi.nlm.nih.gov/pubmed/30760895
http://dx.doi.org/10.1038/s41433-019-0346-x
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author Chao-Shern, Connie
DeDionisio, Lawrence A.
Jang, Jun-Heok
Chan, Clara C.
Thompson, Vance
Christie, Kathleen
Nesbit, M. Andrew
McMullen, C. B. Tara
author_facet Chao-Shern, Connie
DeDionisio, Lawrence A.
Jang, Jun-Heok
Chan, Clara C.
Thompson, Vance
Christie, Kathleen
Nesbit, M. Andrew
McMullen, C. B. Tara
author_sort Chao-Shern, Connie
collection PubMed
description To date, 70 different TGFBI mutations that cause epithelial-stromal corneal dystrophies have been described. At present one commercially available test examines for the five most common of these mutations: R124H, R124C, R124L, R555W, and R555Q. To expand the capability of identifying the causative mutation in the remaining cases, 57 mutations would need to be added. The aim of this study was to obtain a better understanding of the worldwide distribution and population differences of TGFBI mutations and to assess which mutations could be included or excluded from any potential assay. A total of 184 published papers in Human Gene Mutation Database (HGMD) and PubMed from 34 countries worldwide reporting over 1600 corneal dystrophy cases were reviewed. Global data from 600,000 samples using the commercially available test were analyzed. Case studies by University College of London (UCL), Moorfield’s Corneal Dystrophy Study data and 19 samples from patients with clinical abnormality or uncertainty for which the current test detected no mutation were used to predict an achievable detection rate. Data from the literature search showed no difference in the spectrum and frequency of each mutation in different populations or geographical locations. According to our analysis, an increase to the worldwide detection rate in all populations from 75 to 90% could be achieved by the addition of six mutations—H626R, A546D, H572R, G623D, R124S, and M502V—to the currently available test and that may be beneficial for LASIK pre-screening worldwide.
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spelling pubmed-67072962019-08-26 Evaluation of TGFBI corneal dystrophy and molecular diagnostic testing Chao-Shern, Connie DeDionisio, Lawrence A. Jang, Jun-Heok Chan, Clara C. Thompson, Vance Christie, Kathleen Nesbit, M. Andrew McMullen, C. B. Tara Eye (Lond) Review Article To date, 70 different TGFBI mutations that cause epithelial-stromal corneal dystrophies have been described. At present one commercially available test examines for the five most common of these mutations: R124H, R124C, R124L, R555W, and R555Q. To expand the capability of identifying the causative mutation in the remaining cases, 57 mutations would need to be added. The aim of this study was to obtain a better understanding of the worldwide distribution and population differences of TGFBI mutations and to assess which mutations could be included or excluded from any potential assay. A total of 184 published papers in Human Gene Mutation Database (HGMD) and PubMed from 34 countries worldwide reporting over 1600 corneal dystrophy cases were reviewed. Global data from 600,000 samples using the commercially available test were analyzed. Case studies by University College of London (UCL), Moorfield’s Corneal Dystrophy Study data and 19 samples from patients with clinical abnormality or uncertainty for which the current test detected no mutation were used to predict an achievable detection rate. Data from the literature search showed no difference in the spectrum and frequency of each mutation in different populations or geographical locations. According to our analysis, an increase to the worldwide detection rate in all populations from 75 to 90% could be achieved by the addition of six mutations—H626R, A546D, H572R, G623D, R124S, and M502V—to the currently available test and that may be beneficial for LASIK pre-screening worldwide. Nature Publishing Group UK 2019-02-13 2019-06 /pmc/articles/PMC6707296/ /pubmed/30760895 http://dx.doi.org/10.1038/s41433-019-0346-x Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Review Article
Chao-Shern, Connie
DeDionisio, Lawrence A.
Jang, Jun-Heok
Chan, Clara C.
Thompson, Vance
Christie, Kathleen
Nesbit, M. Andrew
McMullen, C. B. Tara
Evaluation of TGFBI corneal dystrophy and molecular diagnostic testing
title Evaluation of TGFBI corneal dystrophy and molecular diagnostic testing
title_full Evaluation of TGFBI corneal dystrophy and molecular diagnostic testing
title_fullStr Evaluation of TGFBI corneal dystrophy and molecular diagnostic testing
title_full_unstemmed Evaluation of TGFBI corneal dystrophy and molecular diagnostic testing
title_short Evaluation of TGFBI corneal dystrophy and molecular diagnostic testing
title_sort evaluation of tgfbi corneal dystrophy and molecular diagnostic testing
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6707296/
https://www.ncbi.nlm.nih.gov/pubmed/30760895
http://dx.doi.org/10.1038/s41433-019-0346-x
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