Cargando…

Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study

A methodology based on the concepts that arise from Density Functional Theory (CDFT) was chosen for the calculation of the global and local reactivity descriptors of the Phallotoxin family of fungal peptides. The determination of the active sites for the molecules has been achieved by resorting some...

Descripción completa

Detalles Bibliográficos
Autores principales: Flores-Holguín, Norma, Frau, Juan, Glossman-Mitnik, Daniel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6710531/
https://www.ncbi.nlm.nih.gov/pubmed/31463408
http://dx.doi.org/10.1016/j.heliyon.2019.e02335
_version_ 1783446364814835712
author Flores-Holguín, Norma
Frau, Juan
Glossman-Mitnik, Daniel
author_facet Flores-Holguín, Norma
Frau, Juan
Glossman-Mitnik, Daniel
author_sort Flores-Holguín, Norma
collection PubMed
description A methodology based on the concepts that arise from Density Functional Theory (CDFT) was chosen for the calculation of the global and local reactivity descriptors of the Phallotoxin family of fungal peptides. The determination of the active sites for the molecules has been achieved by resorting some descriptors within Molecular Electron Density Theory (MEDT) like the Dual Descriptor and the Parr functions. Phallosacin has been found as the most reactive of the peptides on the basis of the calculated Global Reactivity Descriptors. The pKas of the seven studied peptides were established using a proposed relationship between this property and the calculated Global Hardness. The bioactivity properties of the peptides considered in this study were obtained by resorting to a homology model by comparison with the bioactivity of related molecules in their interaction with different receptors.
format Online
Article
Text
id pubmed-6710531
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-67105312019-08-28 Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study Flores-Holguín, Norma Frau, Juan Glossman-Mitnik, Daniel Heliyon Article A methodology based on the concepts that arise from Density Functional Theory (CDFT) was chosen for the calculation of the global and local reactivity descriptors of the Phallotoxin family of fungal peptides. The determination of the active sites for the molecules has been achieved by resorting some descriptors within Molecular Electron Density Theory (MEDT) like the Dual Descriptor and the Parr functions. Phallosacin has been found as the most reactive of the peptides on the basis of the calculated Global Reactivity Descriptors. The pKas of the seven studied peptides were established using a proposed relationship between this property and the calculated Global Hardness. The bioactivity properties of the peptides considered in this study were obtained by resorting to a homology model by comparison with the bioactivity of related molecules in their interaction with different receptors. Elsevier 2019-08-20 /pmc/articles/PMC6710531/ /pubmed/31463408 http://dx.doi.org/10.1016/j.heliyon.2019.e02335 Text en © 2019 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Flores-Holguín, Norma
Frau, Juan
Glossman-Mitnik, Daniel
Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study
title Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study
title_full Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study
title_fullStr Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study
title_full_unstemmed Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study
title_short Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study
title_sort chemical reactivity and bioactivity properties of the phallotoxin family of fungal peptides based on conceptual peptidology and dft study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6710531/
https://www.ncbi.nlm.nih.gov/pubmed/31463408
http://dx.doi.org/10.1016/j.heliyon.2019.e02335
work_keys_str_mv AT floresholguinnorma chemicalreactivityandbioactivitypropertiesofthephallotoxinfamilyoffungalpeptidesbasedonconceptualpeptidologyanddftstudy
AT fraujuan chemicalreactivityandbioactivitypropertiesofthephallotoxinfamilyoffungalpeptidesbasedonconceptualpeptidologyanddftstudy
AT glossmanmitnikdaniel chemicalreactivityandbioactivitypropertiesofthephallotoxinfamilyoffungalpeptidesbasedonconceptualpeptidologyanddftstudy