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A born‐digital field‐to‐database solution for collections‐based research using collNotes and collBook
PREMISE: The digitization of natural history collections includes transcribing specimen label data into standardized formats. Born‐digital specimen data initially gathered in digital formats do not need to be transcribed, enabling their efficient integration into digitized collections. Modernizing f...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6711348/ https://www.ncbi.nlm.nih.gov/pubmed/31467807 http://dx.doi.org/10.1002/aps3.11284 |
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author | Powell, Caleb Motley, Jacob Qin, Hong Shaw, Joey |
author_facet | Powell, Caleb Motley, Jacob Qin, Hong Shaw, Joey |
author_sort | Powell, Caleb |
collection | PubMed |
description | PREMISE: The digitization of natural history collections includes transcribing specimen label data into standardized formats. Born‐digital specimen data initially gathered in digital formats do not need to be transcribed, enabling their efficient integration into digitized collections. Modernizing field collection methods for born‐digital workflows requires the development of new tools and processes. METHODS AND RESULTS: collNotes, a mobile application, was developed for Android and iOS to supplement traditional field journals. Designed for efficiency in the field, collNotes avoids redundant data entries and does not require cellular service. collBook, a companion desktop application, refines field notes into database‐ready formats and produces specimen labels. CONCLUSIONS: collNotes and collBook can be used in combination as a field‐to‐database solution for gathering born‐digital voucher specimen data for plants and fungi. Both programs are open source and use common file types simplifying either program's integration into existing workflows. |
format | Online Article Text |
id | pubmed-6711348 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-67113482019-08-29 A born‐digital field‐to‐database solution for collections‐based research using collNotes and collBook Powell, Caleb Motley, Jacob Qin, Hong Shaw, Joey Appl Plant Sci Software Note PREMISE: The digitization of natural history collections includes transcribing specimen label data into standardized formats. Born‐digital specimen data initially gathered in digital formats do not need to be transcribed, enabling their efficient integration into digitized collections. Modernizing field collection methods for born‐digital workflows requires the development of new tools and processes. METHODS AND RESULTS: collNotes, a mobile application, was developed for Android and iOS to supplement traditional field journals. Designed for efficiency in the field, collNotes avoids redundant data entries and does not require cellular service. collBook, a companion desktop application, refines field notes into database‐ready formats and produces specimen labels. CONCLUSIONS: collNotes and collBook can be used in combination as a field‐to‐database solution for gathering born‐digital voucher specimen data for plants and fungi. Both programs are open source and use common file types simplifying either program's integration into existing workflows. John Wiley and Sons Inc. 2019-08-23 /pmc/articles/PMC6711348/ /pubmed/31467807 http://dx.doi.org/10.1002/aps3.11284 Text en © 2019 Powell et al. Applications in Plant Sciences is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Software Note Powell, Caleb Motley, Jacob Qin, Hong Shaw, Joey A born‐digital field‐to‐database solution for collections‐based research using collNotes and collBook |
title | A born‐digital field‐to‐database solution for collections‐based research using collNotes and collBook |
title_full | A born‐digital field‐to‐database solution for collections‐based research using collNotes and collBook |
title_fullStr | A born‐digital field‐to‐database solution for collections‐based research using collNotes and collBook |
title_full_unstemmed | A born‐digital field‐to‐database solution for collections‐based research using collNotes and collBook |
title_short | A born‐digital field‐to‐database solution for collections‐based research using collNotes and collBook |
title_sort | born‐digital field‐to‐database solution for collections‐based research using collnotes and collbook |
topic | Software Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6711348/ https://www.ncbi.nlm.nih.gov/pubmed/31467807 http://dx.doi.org/10.1002/aps3.11284 |
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