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OLICH: A reference library of DNA barcodes for Nordic lichens

Abstract. BACKGROUND: DNA barcodes are increasingly being used for species identification amongst the lichenised fungi. This paper presents a dataset aiming to provide an authoritative DNA barcode sequence library for a wide array of Nordic lichens. NEW INFORMATION: We present 1324 DNA barcode seque...

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Autores principales: Marthinsen, Gunnhild, Rui, Siri, Timdal, Einar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pensoft Publishers 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6711938/
https://www.ncbi.nlm.nih.gov/pubmed/31523159
http://dx.doi.org/10.3897/BDJ.7.e36252
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author Marthinsen, Gunnhild
Rui, Siri
Timdal, Einar
author_facet Marthinsen, Gunnhild
Rui, Siri
Timdal, Einar
author_sort Marthinsen, Gunnhild
collection PubMed
description Abstract. BACKGROUND: DNA barcodes are increasingly being used for species identification amongst the lichenised fungi. This paper presents a dataset aiming to provide an authoritative DNA barcode sequence library for a wide array of Nordic lichens. NEW INFORMATION: We present 1324 DNA barcode sequences (nrITS) for 507 species in 175 genera and 25 orders. Thirty-eight species are new to GenBank and, for 25 additional species, ITS sequences are here presented for the first time. The dataset covers 20–21% of the Nordic lichenised species. Barcode gap analyses are given and discussed for the three genera Cladonia, Ramalina and Umbilicaria. The new combination Bryobilimbia fissuriseda (Poelt) Timdal, Marthinsen & Rui is proposed for Mycobilimbia fissuriseda and Nordic material of the species, currently referred to as Pseudocyphellaria crocata and Psoroma tenue ssp. boreale, are shown to belong in Pseudocyphellaria citrina and Psoroma cinnamomeum, respectively.
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spelling pubmed-67119382019-09-13 OLICH: A reference library of DNA barcodes for Nordic lichens Marthinsen, Gunnhild Rui, Siri Timdal, Einar Biodivers Data J Data Paper (Biosciences) Abstract. BACKGROUND: DNA barcodes are increasingly being used for species identification amongst the lichenised fungi. This paper presents a dataset aiming to provide an authoritative DNA barcode sequence library for a wide array of Nordic lichens. NEW INFORMATION: We present 1324 DNA barcode sequences (nrITS) for 507 species in 175 genera and 25 orders. Thirty-eight species are new to GenBank and, for 25 additional species, ITS sequences are here presented for the first time. The dataset covers 20–21% of the Nordic lichenised species. Barcode gap analyses are given and discussed for the three genera Cladonia, Ramalina and Umbilicaria. The new combination Bryobilimbia fissuriseda (Poelt) Timdal, Marthinsen & Rui is proposed for Mycobilimbia fissuriseda and Nordic material of the species, currently referred to as Pseudocyphellaria crocata and Psoroma tenue ssp. boreale, are shown to belong in Pseudocyphellaria citrina and Psoroma cinnamomeum, respectively. Pensoft Publishers 2019-08-19 /pmc/articles/PMC6711938/ /pubmed/31523159 http://dx.doi.org/10.3897/BDJ.7.e36252 Text en Gunnhild Marthinsen, Siri Rui, Einar Timdal http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Data Paper (Biosciences)
Marthinsen, Gunnhild
Rui, Siri
Timdal, Einar
OLICH: A reference library of DNA barcodes for Nordic lichens
title OLICH: A reference library of DNA barcodes for Nordic lichens
title_full OLICH: A reference library of DNA barcodes for Nordic lichens
title_fullStr OLICH: A reference library of DNA barcodes for Nordic lichens
title_full_unstemmed OLICH: A reference library of DNA barcodes for Nordic lichens
title_short OLICH: A reference library of DNA barcodes for Nordic lichens
title_sort olich: a reference library of dna barcodes for nordic lichens
topic Data Paper (Biosciences)
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6711938/
https://www.ncbi.nlm.nih.gov/pubmed/31523159
http://dx.doi.org/10.3897/BDJ.7.e36252
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