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Identification of Pathogenic Mutations and Investigation of the NOTCH Pathway Activation in Kartagener Syndrome

Primary ciliary dyskinesia (PCD), a rare genetic disorder, is mostly caused by defects in more than 40 known cilia structure-related genes. However, in approximately 20–35% of patients, it is caused by unknown genetic factors, and the inherited pathogenic factors are difficult to confirm. Kartagener...

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Autores principales: Yue, Yongjian, Huang, Qijun, Zhu, Peng, Zhao, Pan, Tan, Xinjuan, Liu, Shengguo, Li, Shulin, Han, Xuemei, Cheng, Linling, Li, Bo, Fu, Yingyun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6713718/
https://www.ncbi.nlm.nih.gov/pubmed/31507630
http://dx.doi.org/10.3389/fgene.2019.00749
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author Yue, Yongjian
Huang, Qijun
Zhu, Peng
Zhao, Pan
Tan, Xinjuan
Liu, Shengguo
Li, Shulin
Han, Xuemei
Cheng, Linling
Li, Bo
Fu, Yingyun
author_facet Yue, Yongjian
Huang, Qijun
Zhu, Peng
Zhao, Pan
Tan, Xinjuan
Liu, Shengguo
Li, Shulin
Han, Xuemei
Cheng, Linling
Li, Bo
Fu, Yingyun
author_sort Yue, Yongjian
collection PubMed
description Primary ciliary dyskinesia (PCD), a rare genetic disorder, is mostly caused by defects in more than 40 known cilia structure-related genes. However, in approximately 20–35% of patients, it is caused by unknown genetic factors, and the inherited pathogenic factors are difficult to confirm. Kartagener syndrome (KTS) is a subtype of PCD associated with situs inversus, presenting more complex genetic heterogeneity. The aim of this study was to identify pathogenic mutations of candidate genes in Chinese patients with KTS and investigate the activation of the heterotaxy-related NOTCH pathway. Whole-exome sequencing was conducted in five patients with KTS. Pathogenic variants were identified using bioinformatics analysis. Candidate variants were validated by Sanger sequencing. The expression of the NOTCH pathway target genes was detected in patients with KTS. We identified 10 KTS-associated variants in six causative genes, namely, CCDC40, DNAH1, DNAH5, DNAH11, DNAI1, and LRRC6. Only one homozygote mutation was identified in LRRC6 (c.64dupT). Compound heterozygous mutations were found in DNAH1 and DNAH5. Six novel mutations were identified in four genes. Further analyses showed that the NOTCH pathway might be activated in patients with KTS. Overall, our study showed that compound heterozygous mutations widely exist in Chinese KTS patients. Our results demonstrated that the activation of the NOTCH pathway might play a role in the situs inversus pathogenicity of KTS. These findings highlight that Kartagener syndrome might be a complex genetic heterogeneous disorder mediated by heterozygous mutations in multiple PCD- or cilia-related genes.
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spelling pubmed-67137182019-09-10 Identification of Pathogenic Mutations and Investigation of the NOTCH Pathway Activation in Kartagener Syndrome Yue, Yongjian Huang, Qijun Zhu, Peng Zhao, Pan Tan, Xinjuan Liu, Shengguo Li, Shulin Han, Xuemei Cheng, Linling Li, Bo Fu, Yingyun Front Genet Genetics Primary ciliary dyskinesia (PCD), a rare genetic disorder, is mostly caused by defects in more than 40 known cilia structure-related genes. However, in approximately 20–35% of patients, it is caused by unknown genetic factors, and the inherited pathogenic factors are difficult to confirm. Kartagener syndrome (KTS) is a subtype of PCD associated with situs inversus, presenting more complex genetic heterogeneity. The aim of this study was to identify pathogenic mutations of candidate genes in Chinese patients with KTS and investigate the activation of the heterotaxy-related NOTCH pathway. Whole-exome sequencing was conducted in five patients with KTS. Pathogenic variants were identified using bioinformatics analysis. Candidate variants were validated by Sanger sequencing. The expression of the NOTCH pathway target genes was detected in patients with KTS. We identified 10 KTS-associated variants in six causative genes, namely, CCDC40, DNAH1, DNAH5, DNAH11, DNAI1, and LRRC6. Only one homozygote mutation was identified in LRRC6 (c.64dupT). Compound heterozygous mutations were found in DNAH1 and DNAH5. Six novel mutations were identified in four genes. Further analyses showed that the NOTCH pathway might be activated in patients with KTS. Overall, our study showed that compound heterozygous mutations widely exist in Chinese KTS patients. Our results demonstrated that the activation of the NOTCH pathway might play a role in the situs inversus pathogenicity of KTS. These findings highlight that Kartagener syndrome might be a complex genetic heterogeneous disorder mediated by heterozygous mutations in multiple PCD- or cilia-related genes. Frontiers Media S.A. 2019-08-22 /pmc/articles/PMC6713718/ /pubmed/31507630 http://dx.doi.org/10.3389/fgene.2019.00749 Text en Copyright © 2019 Yue, Huang, Zhu, Zhao, Tan, Liu, Li, Han, Cheng, Li and Fu http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Yue, Yongjian
Huang, Qijun
Zhu, Peng
Zhao, Pan
Tan, Xinjuan
Liu, Shengguo
Li, Shulin
Han, Xuemei
Cheng, Linling
Li, Bo
Fu, Yingyun
Identification of Pathogenic Mutations and Investigation of the NOTCH Pathway Activation in Kartagener Syndrome
title Identification of Pathogenic Mutations and Investigation of the NOTCH Pathway Activation in Kartagener Syndrome
title_full Identification of Pathogenic Mutations and Investigation of the NOTCH Pathway Activation in Kartagener Syndrome
title_fullStr Identification of Pathogenic Mutations and Investigation of the NOTCH Pathway Activation in Kartagener Syndrome
title_full_unstemmed Identification of Pathogenic Mutations and Investigation of the NOTCH Pathway Activation in Kartagener Syndrome
title_short Identification of Pathogenic Mutations and Investigation of the NOTCH Pathway Activation in Kartagener Syndrome
title_sort identification of pathogenic mutations and investigation of the notch pathway activation in kartagener syndrome
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6713718/
https://www.ncbi.nlm.nih.gov/pubmed/31507630
http://dx.doi.org/10.3389/fgene.2019.00749
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