Cargando…

Radiomics MRI Phenotyping with Machine Learning to Predict the Grade of Lower-Grade Gliomas: A Study Focused on Nonenhancing Tumors

OBJECTIVE: To assess whether radiomics features derived from multiparametric MRI can predict the tumor grade of lower-grade gliomas (LGGs; World Health Organization grade II and grade III) and the nonenhancing LGG subgroup. MATERIALS AND METHODS: Two-hundred four patients with LGGs from our institut...

Descripción completa

Detalles Bibliográficos
Autores principales: Park, Yae Won, Choi, Yoon Seong, Ahn, Sung Soo, Chang, Jong Hee, Kim, Se Hoon, Lee, Seung-Koo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Korean Society of Radiology 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6715562/
https://www.ncbi.nlm.nih.gov/pubmed/31464116
http://dx.doi.org/10.3348/kjr.2018.0814
_version_ 1783447235259793408
author Park, Yae Won
Choi, Yoon Seong
Ahn, Sung Soo
Chang, Jong Hee
Kim, Se Hoon
Lee, Seung-Koo
author_facet Park, Yae Won
Choi, Yoon Seong
Ahn, Sung Soo
Chang, Jong Hee
Kim, Se Hoon
Lee, Seung-Koo
author_sort Park, Yae Won
collection PubMed
description OBJECTIVE: To assess whether radiomics features derived from multiparametric MRI can predict the tumor grade of lower-grade gliomas (LGGs; World Health Organization grade II and grade III) and the nonenhancing LGG subgroup. MATERIALS AND METHODS: Two-hundred four patients with LGGs from our institutional cohort were allocated to training (n = 136) and test (n = 68) sets. Postcontrast T1-weighted images, T2-weighted images, and fluid-attenuated inversion recovery images were analyzed to extract 250 radiomics features. Various machine learning classifiers were trained using the radiomics features to predict the glioma grade. The trained classifiers were internally validated on the institutional test set and externally validated on a separate cohort (n = 99) from The Cancer Genome Atlas (TCGA). Classifier performance was assessed by determining the area under the curve (AUC) from receiver operating characteristic curve analysis. An identical process was performed in the nonenhancing LGG subgroup (institutional training set, n = 73; institutional test set, n = 37; and TCGA cohort, n = 37) to predict the glioma grade. RESULTS: The performance of the best classifier was good in the internal validation set (AUC, 0.85) and fair in the external validation set (AUC, 0.72) to predict the LGG grade. For the nonenhancing LGG subgroup, the performance of the best classifier was good in the internal validation set (AUC, 0.82), but poor in the external validation set (AUC, 0.68). CONCLUSION: Radiomics feature-based classifiers may be useful to predict LGG grades. However, radiomics classifiers may have a limited value when applied to the nonenhancing LGG subgroup in a TCGA cohort.
format Online
Article
Text
id pubmed-6715562
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher The Korean Society of Radiology
record_format MEDLINE/PubMed
spelling pubmed-67155622019-09-05 Radiomics MRI Phenotyping with Machine Learning to Predict the Grade of Lower-Grade Gliomas: A Study Focused on Nonenhancing Tumors Park, Yae Won Choi, Yoon Seong Ahn, Sung Soo Chang, Jong Hee Kim, Se Hoon Lee, Seung-Koo Korean J Radiol Neuroimaging and Head & Neck OBJECTIVE: To assess whether radiomics features derived from multiparametric MRI can predict the tumor grade of lower-grade gliomas (LGGs; World Health Organization grade II and grade III) and the nonenhancing LGG subgroup. MATERIALS AND METHODS: Two-hundred four patients with LGGs from our institutional cohort were allocated to training (n = 136) and test (n = 68) sets. Postcontrast T1-weighted images, T2-weighted images, and fluid-attenuated inversion recovery images were analyzed to extract 250 radiomics features. Various machine learning classifiers were trained using the radiomics features to predict the glioma grade. The trained classifiers were internally validated on the institutional test set and externally validated on a separate cohort (n = 99) from The Cancer Genome Atlas (TCGA). Classifier performance was assessed by determining the area under the curve (AUC) from receiver operating characteristic curve analysis. An identical process was performed in the nonenhancing LGG subgroup (institutional training set, n = 73; institutional test set, n = 37; and TCGA cohort, n = 37) to predict the glioma grade. RESULTS: The performance of the best classifier was good in the internal validation set (AUC, 0.85) and fair in the external validation set (AUC, 0.72) to predict the LGG grade. For the nonenhancing LGG subgroup, the performance of the best classifier was good in the internal validation set (AUC, 0.82), but poor in the external validation set (AUC, 0.68). CONCLUSION: Radiomics feature-based classifiers may be useful to predict LGG grades. However, radiomics classifiers may have a limited value when applied to the nonenhancing LGG subgroup in a TCGA cohort. The Korean Society of Radiology 2019-09 2019-08-23 /pmc/articles/PMC6715562/ /pubmed/31464116 http://dx.doi.org/10.3348/kjr.2018.0814 Text en Copyright © 2019 The Korean Society of Radiology http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Neuroimaging and Head & Neck
Park, Yae Won
Choi, Yoon Seong
Ahn, Sung Soo
Chang, Jong Hee
Kim, Se Hoon
Lee, Seung-Koo
Radiomics MRI Phenotyping with Machine Learning to Predict the Grade of Lower-Grade Gliomas: A Study Focused on Nonenhancing Tumors
title Radiomics MRI Phenotyping with Machine Learning to Predict the Grade of Lower-Grade Gliomas: A Study Focused on Nonenhancing Tumors
title_full Radiomics MRI Phenotyping with Machine Learning to Predict the Grade of Lower-Grade Gliomas: A Study Focused on Nonenhancing Tumors
title_fullStr Radiomics MRI Phenotyping with Machine Learning to Predict the Grade of Lower-Grade Gliomas: A Study Focused on Nonenhancing Tumors
title_full_unstemmed Radiomics MRI Phenotyping with Machine Learning to Predict the Grade of Lower-Grade Gliomas: A Study Focused on Nonenhancing Tumors
title_short Radiomics MRI Phenotyping with Machine Learning to Predict the Grade of Lower-Grade Gliomas: A Study Focused on Nonenhancing Tumors
title_sort radiomics mri phenotyping with machine learning to predict the grade of lower-grade gliomas: a study focused on nonenhancing tumors
topic Neuroimaging and Head & Neck
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6715562/
https://www.ncbi.nlm.nih.gov/pubmed/31464116
http://dx.doi.org/10.3348/kjr.2018.0814
work_keys_str_mv AT parkyaewon radiomicsmriphenotypingwithmachinelearningtopredictthegradeoflowergradegliomasastudyfocusedonnonenhancingtumors
AT choiyoonseong radiomicsmriphenotypingwithmachinelearningtopredictthegradeoflowergradegliomasastudyfocusedonnonenhancingtumors
AT ahnsungsoo radiomicsmriphenotypingwithmachinelearningtopredictthegradeoflowergradegliomasastudyfocusedonnonenhancingtumors
AT changjonghee radiomicsmriphenotypingwithmachinelearningtopredictthegradeoflowergradegliomasastudyfocusedonnonenhancingtumors
AT kimsehoon radiomicsmriphenotypingwithmachinelearningtopredictthegradeoflowergradegliomasastudyfocusedonnonenhancingtumors
AT leeseungkoo radiomicsmriphenotypingwithmachinelearningtopredictthegradeoflowergradegliomasastudyfocusedonnonenhancingtumors