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A null model of the mouse whole-neocortex micro-connectome
In connectomics, the study of the network structure of connected neurons, great advances are being made on two different scales: that of macro- and meso-scale connectomics, studying the connectivity between populations of neurons, and that of micro-scale connectomics, studying connectivity between i...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6715727/ https://www.ncbi.nlm.nih.gov/pubmed/31467291 http://dx.doi.org/10.1038/s41467-019-11630-x |
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author | Reimann, Michael W. Gevaert, Michael Shi, Ying Lu, Huanxiang Markram, Henry Muller, Eilif |
author_facet | Reimann, Michael W. Gevaert, Michael Shi, Ying Lu, Huanxiang Markram, Henry Muller, Eilif |
author_sort | Reimann, Michael W. |
collection | PubMed |
description | In connectomics, the study of the network structure of connected neurons, great advances are being made on two different scales: that of macro- and meso-scale connectomics, studying the connectivity between populations of neurons, and that of micro-scale connectomics, studying connectivity between individual neurons. We combine these two complementary views of connectomics to build a first draft statistical model of the micro-connectome of a whole mouse neocortex based on available data on region-to-region connectivity and individual whole-brain axon reconstructions. This process reveals a targeting principle that allows us to predict the innervation logic of individual axons from meso-scale data. The resulting connectome recreates biological trends of targeting on all scales and predicts that an established principle of scale invariant topological organization of connectivity can be extended down to the level of individual neurons. It can serve as a powerful null model and as a substrate for whole-brain simulations. |
format | Online Article Text |
id | pubmed-6715727 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-67157272019-09-03 A null model of the mouse whole-neocortex micro-connectome Reimann, Michael W. Gevaert, Michael Shi, Ying Lu, Huanxiang Markram, Henry Muller, Eilif Nat Commun Article In connectomics, the study of the network structure of connected neurons, great advances are being made on two different scales: that of macro- and meso-scale connectomics, studying the connectivity between populations of neurons, and that of micro-scale connectomics, studying connectivity between individual neurons. We combine these two complementary views of connectomics to build a first draft statistical model of the micro-connectome of a whole mouse neocortex based on available data on region-to-region connectivity and individual whole-brain axon reconstructions. This process reveals a targeting principle that allows us to predict the innervation logic of individual axons from meso-scale data. The resulting connectome recreates biological trends of targeting on all scales and predicts that an established principle of scale invariant topological organization of connectivity can be extended down to the level of individual neurons. It can serve as a powerful null model and as a substrate for whole-brain simulations. Nature Publishing Group UK 2019-08-29 /pmc/articles/PMC6715727/ /pubmed/31467291 http://dx.doi.org/10.1038/s41467-019-11630-x Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Reimann, Michael W. Gevaert, Michael Shi, Ying Lu, Huanxiang Markram, Henry Muller, Eilif A null model of the mouse whole-neocortex micro-connectome |
title | A null model of the mouse whole-neocortex micro-connectome |
title_full | A null model of the mouse whole-neocortex micro-connectome |
title_fullStr | A null model of the mouse whole-neocortex micro-connectome |
title_full_unstemmed | A null model of the mouse whole-neocortex micro-connectome |
title_short | A null model of the mouse whole-neocortex micro-connectome |
title_sort | null model of the mouse whole-neocortex micro-connectome |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6715727/ https://www.ncbi.nlm.nih.gov/pubmed/31467291 http://dx.doi.org/10.1038/s41467-019-11630-x |
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