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Deep Machine Learning Techniques for the Detection and Classification of Sperm Whale Bioacoustics

We implemented Machine Learning (ML) techniques to advance the study of sperm whale (Physeter macrocephalus) bioacoustics. This entailed employing Convolutional Neural Networks (CNNs) to construct an echolocation click detector designed to classify spectrograms generated from sperm whale acoustic da...

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Autores principales: Bermant, Peter C., Bronstein, Michael M., Wood, Robert J., Gero, Shane, Gruber, David F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6715799/
https://www.ncbi.nlm.nih.gov/pubmed/31467331
http://dx.doi.org/10.1038/s41598-019-48909-4
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author Bermant, Peter C.
Bronstein, Michael M.
Wood, Robert J.
Gero, Shane
Gruber, David F.
author_facet Bermant, Peter C.
Bronstein, Michael M.
Wood, Robert J.
Gero, Shane
Gruber, David F.
author_sort Bermant, Peter C.
collection PubMed
description We implemented Machine Learning (ML) techniques to advance the study of sperm whale (Physeter macrocephalus) bioacoustics. This entailed employing Convolutional Neural Networks (CNNs) to construct an echolocation click detector designed to classify spectrograms generated from sperm whale acoustic data according to the presence or absence of a click. The click detector achieved 99.5% accuracy in classifying 650 spectrograms. The successful application of CNNs to clicks reveals the potential of future studies to train CNN-based architectures to extract finer-scale details from cetacean spectrograms. Long short-term memory and gated recurrent unit recurrent neural networks were trained to perform classification tasks, including (1) “coda type classification” where we obtained 97.5% accuracy in categorizing 23 coda types from a Dominica dataset containing 8,719 codas and 93.6% accuracy in categorizing 43 coda types from an Eastern Tropical Pacific (ETP) dataset with 16,995 codas; (2) “vocal clan classification” where we obtained 95.3% accuracy for two clan classes from Dominica and 93.1% for four ETP clan types; and (3) “individual whale identification” where we obtained 99.4% accuracy using two Dominica sperm whales. These results demonstrate the feasibility of applying ML to sperm whale bioacoustics and establish the validity of constructing neural networks to learn meaningful representations of whale vocalizations.
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spelling pubmed-67157992019-09-13 Deep Machine Learning Techniques for the Detection and Classification of Sperm Whale Bioacoustics Bermant, Peter C. Bronstein, Michael M. Wood, Robert J. Gero, Shane Gruber, David F. Sci Rep Article We implemented Machine Learning (ML) techniques to advance the study of sperm whale (Physeter macrocephalus) bioacoustics. This entailed employing Convolutional Neural Networks (CNNs) to construct an echolocation click detector designed to classify spectrograms generated from sperm whale acoustic data according to the presence or absence of a click. The click detector achieved 99.5% accuracy in classifying 650 spectrograms. The successful application of CNNs to clicks reveals the potential of future studies to train CNN-based architectures to extract finer-scale details from cetacean spectrograms. Long short-term memory and gated recurrent unit recurrent neural networks were trained to perform classification tasks, including (1) “coda type classification” where we obtained 97.5% accuracy in categorizing 23 coda types from a Dominica dataset containing 8,719 codas and 93.6% accuracy in categorizing 43 coda types from an Eastern Tropical Pacific (ETP) dataset with 16,995 codas; (2) “vocal clan classification” where we obtained 95.3% accuracy for two clan classes from Dominica and 93.1% for four ETP clan types; and (3) “individual whale identification” where we obtained 99.4% accuracy using two Dominica sperm whales. These results demonstrate the feasibility of applying ML to sperm whale bioacoustics and establish the validity of constructing neural networks to learn meaningful representations of whale vocalizations. Nature Publishing Group UK 2019-08-29 /pmc/articles/PMC6715799/ /pubmed/31467331 http://dx.doi.org/10.1038/s41598-019-48909-4 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Bermant, Peter C.
Bronstein, Michael M.
Wood, Robert J.
Gero, Shane
Gruber, David F.
Deep Machine Learning Techniques for the Detection and Classification of Sperm Whale Bioacoustics
title Deep Machine Learning Techniques for the Detection and Classification of Sperm Whale Bioacoustics
title_full Deep Machine Learning Techniques for the Detection and Classification of Sperm Whale Bioacoustics
title_fullStr Deep Machine Learning Techniques for the Detection and Classification of Sperm Whale Bioacoustics
title_full_unstemmed Deep Machine Learning Techniques for the Detection and Classification of Sperm Whale Bioacoustics
title_short Deep Machine Learning Techniques for the Detection and Classification of Sperm Whale Bioacoustics
title_sort deep machine learning techniques for the detection and classification of sperm whale bioacoustics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6715799/
https://www.ncbi.nlm.nih.gov/pubmed/31467331
http://dx.doi.org/10.1038/s41598-019-48909-4
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