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Cumulative ROC curves for discriminating three or more ordinal outcomes with cutpoints on a shared continuous measurement scale
Cumulative receiver operator characteristic (ROC) curve analysis extends classic ROC curve analysis to discriminate three or more ordinal outcome levels on a shared continuous scale. The procedure combines cumulative logit regression with a cumulative extension to the ROC curve and performs as expec...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Public Library of Science
2019
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6716631/ https://www.ncbi.nlm.nih.gov/pubmed/31469848 http://dx.doi.org/10.1371/journal.pone.0221433 |
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author | deCastro, B. Rey |
author_facet | deCastro, B. Rey |
author_sort | deCastro, B. Rey |
collection | PubMed |
description | Cumulative receiver operator characteristic (ROC) curve analysis extends classic ROC curve analysis to discriminate three or more ordinal outcome levels on a shared continuous scale. The procedure combines cumulative logit regression with a cumulative extension to the ROC curve and performs as expected with ternary (three-level) ordinal outcomes under a variety of simulated conditions (unbalanced data, proportional and non-proportional odds, areas under the ROC curve [AUCs] from 0.70 to 0.95). Simulations also compared several criteria for selecting cutpoints to discriminate outcome levels: the Youden Index, Matthews Correlation Coefficient, Total Accuracy, and Markedness. Total Accuracy demonstrated the least absolute percent-bias. Cutpoints computed from maximum likelihood regression parameters demonstrated bias that was often negligible. The procedure was also applied to publicly available data related to computer imaging and biomarker exposure science, yielding good to excellent AUCs, as well as cutpoints with sensitivities and specificities of commensurate quality. Implementation of cumulative ROC curve analysis and extension to more than three outcome levels are straightforward. The author’s programs for ternary ordinal outcomes are publicly available. |
format | Online Article Text |
id | pubmed-6716631 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-67166312019-09-16 Cumulative ROC curves for discriminating three or more ordinal outcomes with cutpoints on a shared continuous measurement scale deCastro, B. Rey PLoS One Research Article Cumulative receiver operator characteristic (ROC) curve analysis extends classic ROC curve analysis to discriminate three or more ordinal outcome levels on a shared continuous scale. The procedure combines cumulative logit regression with a cumulative extension to the ROC curve and performs as expected with ternary (three-level) ordinal outcomes under a variety of simulated conditions (unbalanced data, proportional and non-proportional odds, areas under the ROC curve [AUCs] from 0.70 to 0.95). Simulations also compared several criteria for selecting cutpoints to discriminate outcome levels: the Youden Index, Matthews Correlation Coefficient, Total Accuracy, and Markedness. Total Accuracy demonstrated the least absolute percent-bias. Cutpoints computed from maximum likelihood regression parameters demonstrated bias that was often negligible. The procedure was also applied to publicly available data related to computer imaging and biomarker exposure science, yielding good to excellent AUCs, as well as cutpoints with sensitivities and specificities of commensurate quality. Implementation of cumulative ROC curve analysis and extension to more than three outcome levels are straightforward. The author’s programs for ternary ordinal outcomes are publicly available. Public Library of Science 2019-08-30 /pmc/articles/PMC6716631/ /pubmed/31469848 http://dx.doi.org/10.1371/journal.pone.0221433 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication. |
spellingShingle | Research Article deCastro, B. Rey Cumulative ROC curves for discriminating three or more ordinal outcomes with cutpoints on a shared continuous measurement scale |
title | Cumulative ROC curves for discriminating three or more ordinal outcomes with cutpoints on a shared continuous measurement scale |
title_full | Cumulative ROC curves for discriminating three or more ordinal outcomes with cutpoints on a shared continuous measurement scale |
title_fullStr | Cumulative ROC curves for discriminating three or more ordinal outcomes with cutpoints on a shared continuous measurement scale |
title_full_unstemmed | Cumulative ROC curves for discriminating three or more ordinal outcomes with cutpoints on a shared continuous measurement scale |
title_short | Cumulative ROC curves for discriminating three or more ordinal outcomes with cutpoints on a shared continuous measurement scale |
title_sort | cumulative roc curves for discriminating three or more ordinal outcomes with cutpoints on a shared continuous measurement scale |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6716631/ https://www.ncbi.nlm.nih.gov/pubmed/31469848 http://dx.doi.org/10.1371/journal.pone.0221433 |
work_keys_str_mv | AT decastrobrey cumulativeroccurvesfordiscriminatingthreeormoreordinaloutcomeswithcutpointsonasharedcontinuousmeasurementscale |