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Association of TGF-ß1 polymorphisms and chronic hepatitis C infection: a Meta-analysis
BACKGROUND: Although several researches have reported the connection between the transforming growth factor-beta 1 (TGF-β1) gene polymorphisms and chronic hepatitis C virus (HCV) infection, the conclusions of these studies were not always consistent. Here, this paper proposed a meta-analysis to eval...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6716859/ https://www.ncbi.nlm.nih.gov/pubmed/31470810 http://dx.doi.org/10.1186/s12879-019-4390-8 |
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author | Guo, Pengfei Liu, Shuangyin Sun, Xiangru Xu, Longqin |
author_facet | Guo, Pengfei Liu, Shuangyin Sun, Xiangru Xu, Longqin |
author_sort | Guo, Pengfei |
collection | PubMed |
description | BACKGROUND: Although several researches have reported the connection between the transforming growth factor-beta 1 (TGF-β1) gene polymorphisms and chronic hepatitis C virus (HCV) infection, the conclusions of these studies were not always consistent. Here, this paper proposed a meta-analysis to evaluate whether the TGF-ß1 gene polymorphisms, −509C/T (rs1800469), codon 10 T/C (rs1982073) and codon 25G/C (rs1800471), were associated with chronic HCV infection. METHODS: The summary odds ratios (ORs) of chronic HCV infected patients and controls with all SNPs were obtained by adaptive fixed or random effect model. A series of statistical tools were employed to guarantee the accuracy of related pooling ORs, including the Hardy-Weinberg equilibrium (HWE) test, sensitivity analysis and publication bias test. RESULTS: This paper analyzed 18 case-control studies in 17 articles which totally contains 2718 chronic HCV infection cases corresponding to 1964 controls. The results of the meta-analysis indicated that the −509C/T polymorphism effected an increased risk of chronic HCV infection in all gene models. More specifically by ethnicity stratification, the Egyptians shared the similar association with the above overall study. Moreover, the meta-fusion of healthy control studies showed that − 509 T allele carriers (TT + TA) had nearly 2.00 and 3.36 fold higher risk of chronic HCV infection in the total and Egyptian populations, respectively (OR = 2.004, 95% CI = 1.138–3.528, P = 0.016; OR = 3.363, 95% CI = 1.477–7.655, P = 0.004, respectively). However, our meta-analysis did not find any significant association between the codon 10 T/C or codon 25G/C polymorphisms and chronic HCV infection. CONCLUSIONS: Our results suggested that the TGF-ß1–509C/T polymorphism may effect an increased risk of chronic HCV infection, especially in Egyptian population. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12879-019-4390-8) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6716859 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-67168592019-09-04 Association of TGF-ß1 polymorphisms and chronic hepatitis C infection: a Meta-analysis Guo, Pengfei Liu, Shuangyin Sun, Xiangru Xu, Longqin BMC Infect Dis Research Article BACKGROUND: Although several researches have reported the connection between the transforming growth factor-beta 1 (TGF-β1) gene polymorphisms and chronic hepatitis C virus (HCV) infection, the conclusions of these studies were not always consistent. Here, this paper proposed a meta-analysis to evaluate whether the TGF-ß1 gene polymorphisms, −509C/T (rs1800469), codon 10 T/C (rs1982073) and codon 25G/C (rs1800471), were associated with chronic HCV infection. METHODS: The summary odds ratios (ORs) of chronic HCV infected patients and controls with all SNPs were obtained by adaptive fixed or random effect model. A series of statistical tools were employed to guarantee the accuracy of related pooling ORs, including the Hardy-Weinberg equilibrium (HWE) test, sensitivity analysis and publication bias test. RESULTS: This paper analyzed 18 case-control studies in 17 articles which totally contains 2718 chronic HCV infection cases corresponding to 1964 controls. The results of the meta-analysis indicated that the −509C/T polymorphism effected an increased risk of chronic HCV infection in all gene models. More specifically by ethnicity stratification, the Egyptians shared the similar association with the above overall study. Moreover, the meta-fusion of healthy control studies showed that − 509 T allele carriers (TT + TA) had nearly 2.00 and 3.36 fold higher risk of chronic HCV infection in the total and Egyptian populations, respectively (OR = 2.004, 95% CI = 1.138–3.528, P = 0.016; OR = 3.363, 95% CI = 1.477–7.655, P = 0.004, respectively). However, our meta-analysis did not find any significant association between the codon 10 T/C or codon 25G/C polymorphisms and chronic HCV infection. CONCLUSIONS: Our results suggested that the TGF-ß1–509C/T polymorphism may effect an increased risk of chronic HCV infection, especially in Egyptian population. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12879-019-4390-8) contains supplementary material, which is available to authorized users. BioMed Central 2019-08-30 /pmc/articles/PMC6716859/ /pubmed/31470810 http://dx.doi.org/10.1186/s12879-019-4390-8 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Guo, Pengfei Liu, Shuangyin Sun, Xiangru Xu, Longqin Association of TGF-ß1 polymorphisms and chronic hepatitis C infection: a Meta-analysis |
title | Association of TGF-ß1 polymorphisms and chronic hepatitis C infection: a Meta-analysis |
title_full | Association of TGF-ß1 polymorphisms and chronic hepatitis C infection: a Meta-analysis |
title_fullStr | Association of TGF-ß1 polymorphisms and chronic hepatitis C infection: a Meta-analysis |
title_full_unstemmed | Association of TGF-ß1 polymorphisms and chronic hepatitis C infection: a Meta-analysis |
title_short | Association of TGF-ß1 polymorphisms and chronic hepatitis C infection: a Meta-analysis |
title_sort | association of tgf-ß1 polymorphisms and chronic hepatitis c infection: a meta-analysis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6716859/ https://www.ncbi.nlm.nih.gov/pubmed/31470810 http://dx.doi.org/10.1186/s12879-019-4390-8 |
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