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Alteration of tumor associated neutrophils by PIK3CA expression in endometrial carcinoma from TCGA data
Uterine corpus endometrial carcinoma (UCEC) is one of the most common cancer in female worldwide. PIK3CA has been proven to be a strong prognostic biomarker in UCEC. Nevertheless, current studies have not investigated what effects PIK3CA had on tumor associated neutrophils (TANss). Kaplan-Meier meth...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6717327/ https://www.ncbi.nlm.nih.gov/pubmed/31472672 http://dx.doi.org/10.1186/s13048-019-0557-6 |
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author | Pan, Yinglian Jia, Li Ping Liu, Yuzhu Han, Yixu Deng, Qingchun |
author_facet | Pan, Yinglian Jia, Li Ping Liu, Yuzhu Han, Yixu Deng, Qingchun |
author_sort | Pan, Yinglian |
collection | PubMed |
description | Uterine corpus endometrial carcinoma (UCEC) is one of the most common cancer in female worldwide. PIK3CA has been proven to be a strong prognostic biomarker in UCEC. Nevertheless, current studies have not investigated what effects PIK3CA had on tumor associated neutrophils (TANss). Kaplan-Meier methods were used to compute the survival time of TCGA UCEC patients. GO and KEGG enrichment analysis unveiled relevant pathways PIK3CA affected using DEGs between PIK3CA high expression group and PIK3CA low expression group in TCGA UCEC, as well as GSEA. immune infiltration status was calculated using TIMER. We found that PIK3CA influenced a number of pathways including immune related pathways. The fraction of TANs was certainly altered by PIK3CA expression in UCEC. Our findings suggest that PIK3CA expression may play an important role in tumor immune microenvironment and could alter fraction of TANs in UCEC. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13048-019-0557-6) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6717327 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-67173272019-09-06 Alteration of tumor associated neutrophils by PIK3CA expression in endometrial carcinoma from TCGA data Pan, Yinglian Jia, Li Ping Liu, Yuzhu Han, Yixu Deng, Qingchun J Ovarian Res Research Uterine corpus endometrial carcinoma (UCEC) is one of the most common cancer in female worldwide. PIK3CA has been proven to be a strong prognostic biomarker in UCEC. Nevertheless, current studies have not investigated what effects PIK3CA had on tumor associated neutrophils (TANss). Kaplan-Meier methods were used to compute the survival time of TCGA UCEC patients. GO and KEGG enrichment analysis unveiled relevant pathways PIK3CA affected using DEGs between PIK3CA high expression group and PIK3CA low expression group in TCGA UCEC, as well as GSEA. immune infiltration status was calculated using TIMER. We found that PIK3CA influenced a number of pathways including immune related pathways. The fraction of TANs was certainly altered by PIK3CA expression in UCEC. Our findings suggest that PIK3CA expression may play an important role in tumor immune microenvironment and could alter fraction of TANs in UCEC. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13048-019-0557-6) contains supplementary material, which is available to authorized users. BioMed Central 2019-08-31 /pmc/articles/PMC6717327/ /pubmed/31472672 http://dx.doi.org/10.1186/s13048-019-0557-6 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Pan, Yinglian Jia, Li Ping Liu, Yuzhu Han, Yixu Deng, Qingchun Alteration of tumor associated neutrophils by PIK3CA expression in endometrial carcinoma from TCGA data |
title | Alteration of tumor associated neutrophils by PIK3CA expression in endometrial carcinoma from TCGA data |
title_full | Alteration of tumor associated neutrophils by PIK3CA expression in endometrial carcinoma from TCGA data |
title_fullStr | Alteration of tumor associated neutrophils by PIK3CA expression in endometrial carcinoma from TCGA data |
title_full_unstemmed | Alteration of tumor associated neutrophils by PIK3CA expression in endometrial carcinoma from TCGA data |
title_short | Alteration of tumor associated neutrophils by PIK3CA expression in endometrial carcinoma from TCGA data |
title_sort | alteration of tumor associated neutrophils by pik3ca expression in endometrial carcinoma from tcga data |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6717327/ https://www.ncbi.nlm.nih.gov/pubmed/31472672 http://dx.doi.org/10.1186/s13048-019-0557-6 |
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