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An immune-related gene pairs signature predicts overall survival in serous ovarian carcinoma
BACKGROUND: Ovarian cancer has the highest death rate of all fatal gynecological cancers. Increasing evidence has depicted the correlation between serous ovarian carcinoma prognosis and immune signature. Therefore, the aim of this study is to develop a robust prognostic immune-related gene pairs (IR...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Dove
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6718165/ https://www.ncbi.nlm.nih.gov/pubmed/31695415 http://dx.doi.org/10.2147/OTT.S200191 |
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author | Zhang, Liuyan Zhu, Ping Tong, Yao Wang, Yuzhuo Ma, Haifen Xia, Xuefei Zhou, Yu Zhang, Xingguo Gao, Feng Shu, Peng |
author_facet | Zhang, Liuyan Zhu, Ping Tong, Yao Wang, Yuzhuo Ma, Haifen Xia, Xuefei Zhou, Yu Zhang, Xingguo Gao, Feng Shu, Peng |
author_sort | Zhang, Liuyan |
collection | PubMed |
description | BACKGROUND: Ovarian cancer has the highest death rate of all fatal gynecological cancers. Increasing evidence has depicted the correlation between serous ovarian carcinoma prognosis and immune signature. Therefore, the aim of this study is to develop a robust prognostic immune-related gene pairs (IRGPs) signature for estimating overall survival (OS) of HGSOC. METHODS: Gene expression profiling and clinical information of serous ovarian carcinoma patients were derived from three public data sets, divided into training and validation cohorts. Immune genes significantly associated with prognosis were selected. RESULTS: Among 1,534 immune genes, a 20 IRGPs signature was built which was significantly associated with OS in the training cohort (P=1.44×10(−14); hazard ratio [HR] =3.05 [2.26, 4.10]). In the validation datasets, the IRGPs signature significantly divided patients into high- vs low- risk groups considering their prognosis (P=4.30×10(−3); HR =1.48 [1.13, 1.95]) and was prognostic in multivariate analysis. Functional analysis showed that several biological processes, including EMT and TGF-β related pathways, enriched in the high-risk group. Macrophages M2 was significantly higher in the high-risk group compared with the low-risk group. CONCLUSION: We successfully constructed a robust IRGPs signature with prognostic values for serous ovarian carcinoma, providing new insights into post-operational treatment strategies. |
format | Online Article Text |
id | pubmed-6718165 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Dove |
record_format | MEDLINE/PubMed |
spelling | pubmed-67181652019-11-06 An immune-related gene pairs signature predicts overall survival in serous ovarian carcinoma Zhang, Liuyan Zhu, Ping Tong, Yao Wang, Yuzhuo Ma, Haifen Xia, Xuefei Zhou, Yu Zhang, Xingguo Gao, Feng Shu, Peng Onco Targets Ther Original Research BACKGROUND: Ovarian cancer has the highest death rate of all fatal gynecological cancers. Increasing evidence has depicted the correlation between serous ovarian carcinoma prognosis and immune signature. Therefore, the aim of this study is to develop a robust prognostic immune-related gene pairs (IRGPs) signature for estimating overall survival (OS) of HGSOC. METHODS: Gene expression profiling and clinical information of serous ovarian carcinoma patients were derived from three public data sets, divided into training and validation cohorts. Immune genes significantly associated with prognosis were selected. RESULTS: Among 1,534 immune genes, a 20 IRGPs signature was built which was significantly associated with OS in the training cohort (P=1.44×10(−14); hazard ratio [HR] =3.05 [2.26, 4.10]). In the validation datasets, the IRGPs signature significantly divided patients into high- vs low- risk groups considering their prognosis (P=4.30×10(−3); HR =1.48 [1.13, 1.95]) and was prognostic in multivariate analysis. Functional analysis showed that several biological processes, including EMT and TGF-β related pathways, enriched in the high-risk group. Macrophages M2 was significantly higher in the high-risk group compared with the low-risk group. CONCLUSION: We successfully constructed a robust IRGPs signature with prognostic values for serous ovarian carcinoma, providing new insights into post-operational treatment strategies. Dove 2019-08-28 /pmc/articles/PMC6718165/ /pubmed/31695415 http://dx.doi.org/10.2147/OTT.S200191 Text en © 2019 Zhang et al. http://creativecommons.org/licenses/by-nc/3.0/ This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php). |
spellingShingle | Original Research Zhang, Liuyan Zhu, Ping Tong, Yao Wang, Yuzhuo Ma, Haifen Xia, Xuefei Zhou, Yu Zhang, Xingguo Gao, Feng Shu, Peng An immune-related gene pairs signature predicts overall survival in serous ovarian carcinoma |
title | An immune-related gene pairs signature predicts overall survival in serous ovarian carcinoma |
title_full | An immune-related gene pairs signature predicts overall survival in serous ovarian carcinoma |
title_fullStr | An immune-related gene pairs signature predicts overall survival in serous ovarian carcinoma |
title_full_unstemmed | An immune-related gene pairs signature predicts overall survival in serous ovarian carcinoma |
title_short | An immune-related gene pairs signature predicts overall survival in serous ovarian carcinoma |
title_sort | immune-related gene pairs signature predicts overall survival in serous ovarian carcinoma |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6718165/ https://www.ncbi.nlm.nih.gov/pubmed/31695415 http://dx.doi.org/10.2147/OTT.S200191 |
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