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Evaluation of ADAM33 gene’s single nucleotide polymorphism variants against asthma and the unique pattern of inheritance in Northern and Central Punjab, Pakistan

OBJECTIVES: To investigate the relationship of 3 single nucleotide polymorphism (SNP) variants of ADAM33 with asthma susceptibility in patients from Northern and Central Punjab, Punjab, Pakistan. METHODS: In this case-control study, healthy and asthmatic participants were recruited between 2015 and...

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Autores principales: Ghani, Muhammad U., Sabar, Muhammad F., Bano, Iqbal, Shahid, Mariam, Akram, Muhammad, Khalid, Ifrah, Maryam, Alishba, Khan, Muhammad U.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Saudi Medical Journal 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6718850/
https://www.ncbi.nlm.nih.gov/pubmed/31423513
http://dx.doi.org/10.15537/smj.2019.8.24411
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author Ghani, Muhammad U.
Sabar, Muhammad F.
Bano, Iqbal
Shahid, Mariam
Akram, Muhammad
Khalid, Ifrah
Maryam, Alishba
Khan, Muhammad U.
author_facet Ghani, Muhammad U.
Sabar, Muhammad F.
Bano, Iqbal
Shahid, Mariam
Akram, Muhammad
Khalid, Ifrah
Maryam, Alishba
Khan, Muhammad U.
author_sort Ghani, Muhammad U.
collection PubMed
description OBJECTIVES: To investigate the relationship of 3 single nucleotide polymorphism (SNP) variants of ADAM33 with asthma susceptibility in patients from Northern and Central Punjab, Punjab, Pakistan. METHODS: In this case-control study, healthy and asthmatic participants were recruited between 2015 and 2017. The SNPs of ADAM33 gene, rs2280089, rs2280090, and rs2280091 were analyzed in 296 asthma patients and 343 healthy controls, as well as linkage disequilibrium and haplotype analysis. RESULTS: The non-significant differences were observed in allele and genotype frequencies of the SNPs in asthmatic and healthy persons even after population stratification based on age, caste, gender, family history, and environment. Although these SNPs were non-significant for disease susceptibility among children and adults, a fixed unique pattern of inheritance was nevertheless observed for the studied SNPs. Linkage disequilibrium analysis presented a very strong linkage between the SNP variants to predict their co-inheritance in study population. However, none of the haplotypes were found to be associated with asthma disease development. CONCLUSION: The studied SNPs of ADAM33 appeared to be non-significant for asthma susceptibility in Northern and Central Punjabi population. The fixed allele combination inheritance pattern was a unique observation contrary to findings in other global populations.
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spelling pubmed-67188502019-09-17 Evaluation of ADAM33 gene’s single nucleotide polymorphism variants against asthma and the unique pattern of inheritance in Northern and Central Punjab, Pakistan Ghani, Muhammad U. Sabar, Muhammad F. Bano, Iqbal Shahid, Mariam Akram, Muhammad Khalid, Ifrah Maryam, Alishba Khan, Muhammad U. Saudi Med J Article OBJECTIVES: To investigate the relationship of 3 single nucleotide polymorphism (SNP) variants of ADAM33 with asthma susceptibility in patients from Northern and Central Punjab, Punjab, Pakistan. METHODS: In this case-control study, healthy and asthmatic participants were recruited between 2015 and 2017. The SNPs of ADAM33 gene, rs2280089, rs2280090, and rs2280091 were analyzed in 296 asthma patients and 343 healthy controls, as well as linkage disequilibrium and haplotype analysis. RESULTS: The non-significant differences were observed in allele and genotype frequencies of the SNPs in asthmatic and healthy persons even after population stratification based on age, caste, gender, family history, and environment. Although these SNPs were non-significant for disease susceptibility among children and adults, a fixed unique pattern of inheritance was nevertheless observed for the studied SNPs. Linkage disequilibrium analysis presented a very strong linkage between the SNP variants to predict their co-inheritance in study population. However, none of the haplotypes were found to be associated with asthma disease development. CONCLUSION: The studied SNPs of ADAM33 appeared to be non-significant for asthma susceptibility in Northern and Central Punjabi population. The fixed allele combination inheritance pattern was a unique observation contrary to findings in other global populations. Saudi Medical Journal 2019-08 /pmc/articles/PMC6718850/ /pubmed/31423513 http://dx.doi.org/10.15537/smj.2019.8.24411 Text en Copyright: © Saudi Medical Journal http://creativecommons.org/licenses/by-nc-sa/3.0 This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-Share Alike 3.0 Unported, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Article
Ghani, Muhammad U.
Sabar, Muhammad F.
Bano, Iqbal
Shahid, Mariam
Akram, Muhammad
Khalid, Ifrah
Maryam, Alishba
Khan, Muhammad U.
Evaluation of ADAM33 gene’s single nucleotide polymorphism variants against asthma and the unique pattern of inheritance in Northern and Central Punjab, Pakistan
title Evaluation of ADAM33 gene’s single nucleotide polymorphism variants against asthma and the unique pattern of inheritance in Northern and Central Punjab, Pakistan
title_full Evaluation of ADAM33 gene’s single nucleotide polymorphism variants against asthma and the unique pattern of inheritance in Northern and Central Punjab, Pakistan
title_fullStr Evaluation of ADAM33 gene’s single nucleotide polymorphism variants against asthma and the unique pattern of inheritance in Northern and Central Punjab, Pakistan
title_full_unstemmed Evaluation of ADAM33 gene’s single nucleotide polymorphism variants against asthma and the unique pattern of inheritance in Northern and Central Punjab, Pakistan
title_short Evaluation of ADAM33 gene’s single nucleotide polymorphism variants against asthma and the unique pattern of inheritance in Northern and Central Punjab, Pakistan
title_sort evaluation of adam33 gene’s single nucleotide polymorphism variants against asthma and the unique pattern of inheritance in northern and central punjab, pakistan
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6718850/
https://www.ncbi.nlm.nih.gov/pubmed/31423513
http://dx.doi.org/10.15537/smj.2019.8.24411
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