Cargando…
Identification of Maize CC-Type Glutaredoxins That Are Associated with Response to Drought Stress
Global maize cultivation is often adversely affected by drought stress. The CC-type glutaredoxin (GRX) genes form a plant-specific subfamily that regulate plant growth and respond to environmental stresses. However, how maize CC-type GRX (ZmGRXCC) genes respond to drought stress remains unclear. We...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6722656/ https://www.ncbi.nlm.nih.gov/pubmed/31409044 http://dx.doi.org/10.3390/genes10080610 |
_version_ | 1783448588872843264 |
---|---|
author | Ding, Shuangcheng He, Fengyu Tang, Wenlin Du, Hewei Wang, Hongwei |
author_facet | Ding, Shuangcheng He, Fengyu Tang, Wenlin Du, Hewei Wang, Hongwei |
author_sort | Ding, Shuangcheng |
collection | PubMed |
description | Global maize cultivation is often adversely affected by drought stress. The CC-type glutaredoxin (GRX) genes form a plant-specific subfamily that regulate plant growth and respond to environmental stresses. However, how maize CC-type GRX (ZmGRXCC) genes respond to drought stress remains unclear. We performed a TBLASTN search to identify ZmGRXCCs in the maize genome and verified the identified sequences using the NCBI conservative domain database (CDD). We further established a phylogenetic tree using Mega7 and surveyed known cis-elements in the promoters of ZmGRXCCs using the PlantCARE database. We found twenty-one ZmGRXCCs in the maize genome by a genome-wide investigation and compared their phylogenetic relationships with rice, maize, and Arabidopsis. The analysis of their redox active sites showed that most of the 21 ZmGRXCCs share similar structures with their homologs. We assessed their expression at young seedlings and adult leaves under drought stress and their expression profiles in 15 tissues, and found that they were differentially expressed, indicating that different ZmGRXCC genes have different functions. Notably, ZmGRXCC14 is up-regulated at seedling, V12, V14, V16, and R1 stages. Importantly, significant associations between genetic variation in ZmGRXCC14 and drought tolerance are found at the seedling stage. These results will help to advance the study of the function of ZmGRXCCs genes under drought stress and understand the mechanism of drought resistance in maize. |
format | Online Article Text |
id | pubmed-6722656 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-67226562019-09-10 Identification of Maize CC-Type Glutaredoxins That Are Associated with Response to Drought Stress Ding, Shuangcheng He, Fengyu Tang, Wenlin Du, Hewei Wang, Hongwei Genes (Basel) Article Global maize cultivation is often adversely affected by drought stress. The CC-type glutaredoxin (GRX) genes form a plant-specific subfamily that regulate plant growth and respond to environmental stresses. However, how maize CC-type GRX (ZmGRXCC) genes respond to drought stress remains unclear. We performed a TBLASTN search to identify ZmGRXCCs in the maize genome and verified the identified sequences using the NCBI conservative domain database (CDD). We further established a phylogenetic tree using Mega7 and surveyed known cis-elements in the promoters of ZmGRXCCs using the PlantCARE database. We found twenty-one ZmGRXCCs in the maize genome by a genome-wide investigation and compared their phylogenetic relationships with rice, maize, and Arabidopsis. The analysis of their redox active sites showed that most of the 21 ZmGRXCCs share similar structures with their homologs. We assessed their expression at young seedlings and adult leaves under drought stress and their expression profiles in 15 tissues, and found that they were differentially expressed, indicating that different ZmGRXCC genes have different functions. Notably, ZmGRXCC14 is up-regulated at seedling, V12, V14, V16, and R1 stages. Importantly, significant associations between genetic variation in ZmGRXCC14 and drought tolerance are found at the seedling stage. These results will help to advance the study of the function of ZmGRXCCs genes under drought stress and understand the mechanism of drought resistance in maize. MDPI 2019-08-12 /pmc/articles/PMC6722656/ /pubmed/31409044 http://dx.doi.org/10.3390/genes10080610 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Ding, Shuangcheng He, Fengyu Tang, Wenlin Du, Hewei Wang, Hongwei Identification of Maize CC-Type Glutaredoxins That Are Associated with Response to Drought Stress |
title | Identification of Maize CC-Type Glutaredoxins That Are Associated with Response to Drought Stress |
title_full | Identification of Maize CC-Type Glutaredoxins That Are Associated with Response to Drought Stress |
title_fullStr | Identification of Maize CC-Type Glutaredoxins That Are Associated with Response to Drought Stress |
title_full_unstemmed | Identification of Maize CC-Type Glutaredoxins That Are Associated with Response to Drought Stress |
title_short | Identification of Maize CC-Type Glutaredoxins That Are Associated with Response to Drought Stress |
title_sort | identification of maize cc-type glutaredoxins that are associated with response to drought stress |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6722656/ https://www.ncbi.nlm.nih.gov/pubmed/31409044 http://dx.doi.org/10.3390/genes10080610 |
work_keys_str_mv | AT dingshuangcheng identificationofmaizecctypeglutaredoxinsthatareassociatedwithresponsetodroughtstress AT hefengyu identificationofmaizecctypeglutaredoxinsthatareassociatedwithresponsetodroughtstress AT tangwenlin identificationofmaizecctypeglutaredoxinsthatareassociatedwithresponsetodroughtstress AT duhewei identificationofmaizecctypeglutaredoxinsthatareassociatedwithresponsetodroughtstress AT wanghongwei identificationofmaizecctypeglutaredoxinsthatareassociatedwithresponsetodroughtstress |