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Characterization of Salinivibrio socompensis sp. nov., A New Halophilic Bacterium Isolated from the High-Altitude Hypersaline Lake Socompa, Argentina

The genus Salinivibrio belongs to the family Vibrionaceae and includes Gram-stain-negative, motile by a polar flagellum, and facultatively anaerobic curved rods. They are halophilic bacteria commonly found in hypersaline aquatic habitats and salted foods. This genus includes five species and two sub...

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Autores principales: Galisteo, Cristina, Sánchez-Porro, Cristina, de la Haba, Rafael R., López-Hermoso, Clara, Fernández, Ana B., Farias, María E., Ventosa, Antonio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6723482/
https://www.ncbi.nlm.nih.gov/pubmed/31387286
http://dx.doi.org/10.3390/microorganisms7080241
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author Galisteo, Cristina
Sánchez-Porro, Cristina
de la Haba, Rafael R.
López-Hermoso, Clara
Fernández, Ana B.
Farias, María E.
Ventosa, Antonio
author_facet Galisteo, Cristina
Sánchez-Porro, Cristina
de la Haba, Rafael R.
López-Hermoso, Clara
Fernández, Ana B.
Farias, María E.
Ventosa, Antonio
author_sort Galisteo, Cristina
collection PubMed
description The genus Salinivibrio belongs to the family Vibrionaceae and includes Gram-stain-negative, motile by a polar flagellum, and facultatively anaerobic curved rods. They are halophilic bacteria commonly found in hypersaline aquatic habitats and salted foods. This genus includes five species and two subspecies. A presumed novel species, strain S35(T), was previously isolated from the high-altitude volcanic, alkaline, and saline lake Socompa (Argentinean Andes). In this study we carried out a complete taxonomic characterization of strain S35(T), including the 16S rRNA gene sequence and core-genome analysis, the average nucleotide identity (ANIb, ANIm, and orthoANI), and in silico DNA–DNA hybridization (GGDC), as well as the phenotypic and chemotaxonomic characterization. It grew at 3%–20% (w/v) NaCl, pH 6–10, and 10–42 °C, with optimum growth at 7.0%–7.5% (w/v) NaCl, pH 8.0, and 37 °C, respectively. Strain S35(T) was oxidase- and catalase-positive, able to produce acid from D-glucose and other carbohydrates. Hydrolysis of DNA, methyl red test, and nitrate and nitrite reduction were positive. Its main fatty acids were C(16:0), C(16:1) ω7c and C(16:1) ω6c, and C(18:1) ω7c and/or C(18:1) ω6c. ANI, GGDC, and core-genome analysis determined that strain S35(T) constitutes a novel species of the genus Salinivibrio, for which the name Salinivibrio socompensis sp. nov. is proposed. The type strain is S35(T) (= CECT 9634(T) = BNM 0535(T)).
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spelling pubmed-67234822019-09-10 Characterization of Salinivibrio socompensis sp. nov., A New Halophilic Bacterium Isolated from the High-Altitude Hypersaline Lake Socompa, Argentina Galisteo, Cristina Sánchez-Porro, Cristina de la Haba, Rafael R. López-Hermoso, Clara Fernández, Ana B. Farias, María E. Ventosa, Antonio Microorganisms Article The genus Salinivibrio belongs to the family Vibrionaceae and includes Gram-stain-negative, motile by a polar flagellum, and facultatively anaerobic curved rods. They are halophilic bacteria commonly found in hypersaline aquatic habitats and salted foods. This genus includes five species and two subspecies. A presumed novel species, strain S35(T), was previously isolated from the high-altitude volcanic, alkaline, and saline lake Socompa (Argentinean Andes). In this study we carried out a complete taxonomic characterization of strain S35(T), including the 16S rRNA gene sequence and core-genome analysis, the average nucleotide identity (ANIb, ANIm, and orthoANI), and in silico DNA–DNA hybridization (GGDC), as well as the phenotypic and chemotaxonomic characterization. It grew at 3%–20% (w/v) NaCl, pH 6–10, and 10–42 °C, with optimum growth at 7.0%–7.5% (w/v) NaCl, pH 8.0, and 37 °C, respectively. Strain S35(T) was oxidase- and catalase-positive, able to produce acid from D-glucose and other carbohydrates. Hydrolysis of DNA, methyl red test, and nitrate and nitrite reduction were positive. Its main fatty acids were C(16:0), C(16:1) ω7c and C(16:1) ω6c, and C(18:1) ω7c and/or C(18:1) ω6c. ANI, GGDC, and core-genome analysis determined that strain S35(T) constitutes a novel species of the genus Salinivibrio, for which the name Salinivibrio socompensis sp. nov. is proposed. The type strain is S35(T) (= CECT 9634(T) = BNM 0535(T)). MDPI 2019-08-05 /pmc/articles/PMC6723482/ /pubmed/31387286 http://dx.doi.org/10.3390/microorganisms7080241 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Galisteo, Cristina
Sánchez-Porro, Cristina
de la Haba, Rafael R.
López-Hermoso, Clara
Fernández, Ana B.
Farias, María E.
Ventosa, Antonio
Characterization of Salinivibrio socompensis sp. nov., A New Halophilic Bacterium Isolated from the High-Altitude Hypersaline Lake Socompa, Argentina
title Characterization of Salinivibrio socompensis sp. nov., A New Halophilic Bacterium Isolated from the High-Altitude Hypersaline Lake Socompa, Argentina
title_full Characterization of Salinivibrio socompensis sp. nov., A New Halophilic Bacterium Isolated from the High-Altitude Hypersaline Lake Socompa, Argentina
title_fullStr Characterization of Salinivibrio socompensis sp. nov., A New Halophilic Bacterium Isolated from the High-Altitude Hypersaline Lake Socompa, Argentina
title_full_unstemmed Characterization of Salinivibrio socompensis sp. nov., A New Halophilic Bacterium Isolated from the High-Altitude Hypersaline Lake Socompa, Argentina
title_short Characterization of Salinivibrio socompensis sp. nov., A New Halophilic Bacterium Isolated from the High-Altitude Hypersaline Lake Socompa, Argentina
title_sort characterization of salinivibrio socompensis sp. nov., a new halophilic bacterium isolated from the high-altitude hypersaline lake socompa, argentina
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6723482/
https://www.ncbi.nlm.nih.gov/pubmed/31387286
http://dx.doi.org/10.3390/microorganisms7080241
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