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Deciphering the hydrogen-bonding scheme in the crystal structure of tri­phenyl­methanol: a tribute to George Ferguson and co-workers

The crystal structure of tri­phenyl­methanol, C(19)H(16)O, has been redetermined using data collected at 295 and 153 K, and is compared to the model published by Ferguson et al. over 25 years ago [Ferguson et al. (1992 ▸). Acta Cryst. C48, 1272–1275] and that published by Serrano-González et al., us...

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Autores principales: Rodríguez Tzompantzi, Tomasa, Amaro Hernández, Aldo Guillermo, Meza-León, Rosa Luisa, Bernès, Sylvain
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6727172/
https://www.ncbi.nlm.nih.gov/pubmed/31484815
http://dx.doi.org/10.1107/S2053229619010714
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author Rodríguez Tzompantzi, Tomasa
Amaro Hernández, Aldo Guillermo
Meza-León, Rosa Luisa
Bernès, Sylvain
author_facet Rodríguez Tzompantzi, Tomasa
Amaro Hernández, Aldo Guillermo
Meza-León, Rosa Luisa
Bernès, Sylvain
author_sort Rodríguez Tzompantzi, Tomasa
collection PubMed
description The crystal structure of tri­phenyl­methanol, C(19)H(16)O, has been redetermined using data collected at 295 and 153 K, and is compared to the model published by Ferguson et al. over 25 years ago [Ferguson et al. (1992 ▸). Acta Cryst. C48, 1272–1275] and that published by Serrano-González et al., using neutron and X-ray diffraction data [Serrano-González et al. (1999 ▸). J. Phys. Chem. B, 103, 6215–6223]. As predicted by these authors, the hy­droxy groups are involved in weak inter­molecular hydrogen bonds in the crystal, forming tetra­hedral tetra­­mers based on the two independent mol­ecules in the asymmetric unit, one of which is placed on the threefold symmetry axis of the R [Image: see text] space group. However, the reliable determination of the hy­droxy H-atom positions is difficult to achieve, for two reasons. Firstly, a positional disorder affects the full asymmetric unit, which is split over two sets of positions, with occupancy factors of ca 0.74 and 0.26. Secondly, all hy­droxy H atoms are further disordered, either by symmetry, or through a positional disorder in the case of parts placed in general positions. We show that the correct description of the hydrogen-bonding scheme is possible only if diffraction data are collected at low temperature. The pro­chiral character of the hydrogen-bonded tetra­meric supra­molecular clusters leads to enanti­omorphic three-dimensional graphs in each tetra­mer. The crystal is thus a racemic mixture of (sup) S and (sup) R motifs, consistent with the centro­symmetric nature of the R [Image: see text] space group.
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spelling pubmed-67271722019-09-09 Deciphering the hydrogen-bonding scheme in the crystal structure of tri­phenyl­methanol: a tribute to George Ferguson and co-workers Rodríguez Tzompantzi, Tomasa Amaro Hernández, Aldo Guillermo Meza-León, Rosa Luisa Bernès, Sylvain Acta Crystallogr C Struct Chem Research Papers The crystal structure of tri­phenyl­methanol, C(19)H(16)O, has been redetermined using data collected at 295 and 153 K, and is compared to the model published by Ferguson et al. over 25 years ago [Ferguson et al. (1992 ▸). Acta Cryst. C48, 1272–1275] and that published by Serrano-González et al., using neutron and X-ray diffraction data [Serrano-González et al. (1999 ▸). J. Phys. Chem. B, 103, 6215–6223]. As predicted by these authors, the hy­droxy groups are involved in weak inter­molecular hydrogen bonds in the crystal, forming tetra­hedral tetra­­mers based on the two independent mol­ecules in the asymmetric unit, one of which is placed on the threefold symmetry axis of the R [Image: see text] space group. However, the reliable determination of the hy­droxy H-atom positions is difficult to achieve, for two reasons. Firstly, a positional disorder affects the full asymmetric unit, which is split over two sets of positions, with occupancy factors of ca 0.74 and 0.26. Secondly, all hy­droxy H atoms are further disordered, either by symmetry, or through a positional disorder in the case of parts placed in general positions. We show that the correct description of the hydrogen-bonding scheme is possible only if diffraction data are collected at low temperature. The pro­chiral character of the hydrogen-bonded tetra­meric supra­molecular clusters leads to enanti­omorphic three-dimensional graphs in each tetra­mer. The crystal is thus a racemic mixture of (sup) S and (sup) R motifs, consistent with the centro­symmetric nature of the R [Image: see text] space group. International Union of Crystallography 2019-08-14 /pmc/articles/PMC6727172/ /pubmed/31484815 http://dx.doi.org/10.1107/S2053229619010714 Text en © Rodríguez Tzompantzi et al. 2019 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Papers
Rodríguez Tzompantzi, Tomasa
Amaro Hernández, Aldo Guillermo
Meza-León, Rosa Luisa
Bernès, Sylvain
Deciphering the hydrogen-bonding scheme in the crystal structure of tri­phenyl­methanol: a tribute to George Ferguson and co-workers
title Deciphering the hydrogen-bonding scheme in the crystal structure of tri­phenyl­methanol: a tribute to George Ferguson and co-workers
title_full Deciphering the hydrogen-bonding scheme in the crystal structure of tri­phenyl­methanol: a tribute to George Ferguson and co-workers
title_fullStr Deciphering the hydrogen-bonding scheme in the crystal structure of tri­phenyl­methanol: a tribute to George Ferguson and co-workers
title_full_unstemmed Deciphering the hydrogen-bonding scheme in the crystal structure of tri­phenyl­methanol: a tribute to George Ferguson and co-workers
title_short Deciphering the hydrogen-bonding scheme in the crystal structure of tri­phenyl­methanol: a tribute to George Ferguson and co-workers
title_sort deciphering the hydrogen-bonding scheme in the crystal structure of tri­phenyl­methanol: a tribute to george ferguson and co-workers
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6727172/
https://www.ncbi.nlm.nih.gov/pubmed/31484815
http://dx.doi.org/10.1107/S2053229619010714
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