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Field Suitability and Diagnostic Accuracy of the Biocentric Open Real-Time PCR Platform for Dried Blood Spot–Based HIV Viral Load Quantification in Eswatini
BACKGROUND: To assess the performance and suitability of dried blood spot (DBS) sampling using filter paper to collect blood for viral load (VL) quantification under routine conditions. METHODS: We compared performance of DBS VL quantification using the Biocentric method with plasma VL quantificatio...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
JAIDS Journal of Acquired Immune Deficiency Syndromes
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6727953/ https://www.ncbi.nlm.nih.gov/pubmed/31408452 http://dx.doi.org/10.1097/QAI.0000000000002101 |
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author | Kerschberger, Bernhard Ntshalintshali, Nombuso Mpala, Qhubekani Díaz Uribe, Paola Andrea Maphalala, Gugu Kalombola, Sydney Telila, Addissu Bekele Chawinga, Tiwonge Maphalala, Mukelo Jani, Aditi Phugwayo, Nomcebo de la Tour, Roberto Nyoni, Nomxolise Goiri, Javier Dlamini, Sindisiwe Ciglenecki, Iza Fajardo, Emmanuel |
author_facet | Kerschberger, Bernhard Ntshalintshali, Nombuso Mpala, Qhubekani Díaz Uribe, Paola Andrea Maphalala, Gugu Kalombola, Sydney Telila, Addissu Bekele Chawinga, Tiwonge Maphalala, Mukelo Jani, Aditi Phugwayo, Nomcebo de la Tour, Roberto Nyoni, Nomxolise Goiri, Javier Dlamini, Sindisiwe Ciglenecki, Iza Fajardo, Emmanuel |
author_sort | Kerschberger, Bernhard |
collection | PubMed |
description | BACKGROUND: To assess the performance and suitability of dried blood spot (DBS) sampling using filter paper to collect blood for viral load (VL) quantification under routine conditions. METHODS: We compared performance of DBS VL quantification using the Biocentric method with plasma VL quantification using Roche and Biocentric as reference methods. Adults (≥18 years) were enrolled at 2 health facilities in Eswatini from October 12, 2016 to March 1, 2017. DBS samples were prepared through finger-prick by a phlebotomist (DBS-1), and through the pipetting of whole venous blood by a phlebotomist (DBS-2) and by a laboratory technologist (DBS-3). We calculated the VL-testing completion rate, correlation, and agreement, as well as diagnostic accuracy estimates at the clinical threshold of 1000 copies/mL. RESULTS: Of 362 patients enrolled, 1066 DBS cards (DBS-1: 347; DBS-2: 359; DBS-3: 360) were tested. Overall, test characteristics were comparable between DBS-sampling methods, irrespective of the reference method. The Pearson correlation coefficients ranged from 0.67 to 0.82 (P < 0.001) for different types of DBS sampling using both reference methods, and the Bland–Altman difference ranged from 0.15 to 0.30 log(10) copies/mL. Sensitivity estimates were from 85.3% to 89.2% and specificity estimates were from 94.5% to 98.6%. The positive predictive values were between 87.0% and 96.5% at a prevalence of 30% VL elevations, and negative predictive values were between 93.7% and 95.4%. CONCLUSIONS: DBS VL quantification using the newly configured Biocentric method can be part of contextualized VL-testing strategies, particularly for remote settings and populations with higher viral failure rates. |
format | Online Article Text |
id | pubmed-6727953 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | JAIDS Journal of Acquired Immune Deficiency Syndromes |
record_format | MEDLINE/PubMed |
spelling | pubmed-67279532019-10-02 Field Suitability and Diagnostic Accuracy of the Biocentric Open Real-Time PCR Platform for Dried Blood Spot–Based HIV Viral Load Quantification in Eswatini Kerschberger, Bernhard Ntshalintshali, Nombuso Mpala, Qhubekani Díaz Uribe, Paola Andrea Maphalala, Gugu Kalombola, Sydney Telila, Addissu Bekele Chawinga, Tiwonge Maphalala, Mukelo Jani, Aditi Phugwayo, Nomcebo de la Tour, Roberto Nyoni, Nomxolise Goiri, Javier Dlamini, Sindisiwe Ciglenecki, Iza Fajardo, Emmanuel J Acquir Immune Defic Syndr Clinical Science BACKGROUND: To assess the performance and suitability of dried blood spot (DBS) sampling using filter paper to collect blood for viral load (VL) quantification under routine conditions. METHODS: We compared performance of DBS VL quantification using the Biocentric method with plasma VL quantification using Roche and Biocentric as reference methods. Adults (≥18 years) were enrolled at 2 health facilities in Eswatini from October 12, 2016 to March 1, 2017. DBS samples were prepared through finger-prick by a phlebotomist (DBS-1), and through the pipetting of whole venous blood by a phlebotomist (DBS-2) and by a laboratory technologist (DBS-3). We calculated the VL-testing completion rate, correlation, and agreement, as well as diagnostic accuracy estimates at the clinical threshold of 1000 copies/mL. RESULTS: Of 362 patients enrolled, 1066 DBS cards (DBS-1: 347; DBS-2: 359; DBS-3: 360) were tested. Overall, test characteristics were comparable between DBS-sampling methods, irrespective of the reference method. The Pearson correlation coefficients ranged from 0.67 to 0.82 (P < 0.001) for different types of DBS sampling using both reference methods, and the Bland–Altman difference ranged from 0.15 to 0.30 log(10) copies/mL. Sensitivity estimates were from 85.3% to 89.2% and specificity estimates were from 94.5% to 98.6%. The positive predictive values were between 87.0% and 96.5% at a prevalence of 30% VL elevations, and negative predictive values were between 93.7% and 95.4%. CONCLUSIONS: DBS VL quantification using the newly configured Biocentric method can be part of contextualized VL-testing strategies, particularly for remote settings and populations with higher viral failure rates. JAIDS Journal of Acquired Immune Deficiency Syndromes 2019-09-01 2019-05-20 /pmc/articles/PMC6727953/ /pubmed/31408452 http://dx.doi.org/10.1097/QAI.0000000000002101 Text en Copyright © 2019 The Author(s). Published by Wolters Kluwer Health, Inc. This is an open-access article distributed under the terms of the Creative Commons Attribution-Non Commercial-No Derivatives License 4.0 (CCBY-NC-ND) (http://creativecommons.org/licenses/by-nc-nd/4.0/) , where it is permissible to download and share the work provided it is properly cited. The work cannot be changed in any way or used commercially without permission from the journal. |
spellingShingle | Clinical Science Kerschberger, Bernhard Ntshalintshali, Nombuso Mpala, Qhubekani Díaz Uribe, Paola Andrea Maphalala, Gugu Kalombola, Sydney Telila, Addissu Bekele Chawinga, Tiwonge Maphalala, Mukelo Jani, Aditi Phugwayo, Nomcebo de la Tour, Roberto Nyoni, Nomxolise Goiri, Javier Dlamini, Sindisiwe Ciglenecki, Iza Fajardo, Emmanuel Field Suitability and Diagnostic Accuracy of the Biocentric Open Real-Time PCR Platform for Dried Blood Spot–Based HIV Viral Load Quantification in Eswatini |
title | Field Suitability and Diagnostic Accuracy of the Biocentric Open Real-Time PCR Platform for Dried Blood Spot–Based HIV Viral Load Quantification in Eswatini |
title_full | Field Suitability and Diagnostic Accuracy of the Biocentric Open Real-Time PCR Platform for Dried Blood Spot–Based HIV Viral Load Quantification in Eswatini |
title_fullStr | Field Suitability and Diagnostic Accuracy of the Biocentric Open Real-Time PCR Platform for Dried Blood Spot–Based HIV Viral Load Quantification in Eswatini |
title_full_unstemmed | Field Suitability and Diagnostic Accuracy of the Biocentric Open Real-Time PCR Platform for Dried Blood Spot–Based HIV Viral Load Quantification in Eswatini |
title_short | Field Suitability and Diagnostic Accuracy of the Biocentric Open Real-Time PCR Platform for Dried Blood Spot–Based HIV Viral Load Quantification in Eswatini |
title_sort | field suitability and diagnostic accuracy of the biocentric open real-time pcr platform for dried blood spot–based hiv viral load quantification in eswatini |
topic | Clinical Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6727953/ https://www.ncbi.nlm.nih.gov/pubmed/31408452 http://dx.doi.org/10.1097/QAI.0000000000002101 |
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