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NMR-based metabolite studies with (15)N amino acids
(15)N labeled amino acids are routinely used to label proteins or nucleic acids for study by NMR. However, NMR studies of (15)N labeled amino acids in metabolite studies have not been pursued extensively, presumably due to line broadening present under standard experimental conditions. In this work,...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6728425/ https://www.ncbi.nlm.nih.gov/pubmed/31488858 http://dx.doi.org/10.1038/s41598-019-49208-8 |
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author | Ramirez, Benjamin Durst, Matthew A. Lavie, Arnon Caffrey, Michael |
author_facet | Ramirez, Benjamin Durst, Matthew A. Lavie, Arnon Caffrey, Michael |
author_sort | Ramirez, Benjamin |
collection | PubMed |
description | (15)N labeled amino acids are routinely used to label proteins or nucleic acids for study by NMR. However, NMR studies of (15)N labeled amino acids in metabolite studies have not been pursued extensively, presumably due to line broadening present under standard experimental conditions. In this work, we show that lowering the temperature to −5 °C allows facile characterization of (15)N-labeled amino acids. Further, we show that this technique can be exploited to measure (15)NH(3) produced in an enzyme catalyzed reaction and the transport and metabolism of individual amino acids in mammalian cell culture. With respect to (13)C-labeled amino acids, (15)N-labeled amino acids are less costly and enable direct characterization of nitrogen metabolism in complex biological systems by NMR. In summary, the present work significantly expands the metabolite pools and their reactions for study by NMR. |
format | Online Article Text |
id | pubmed-6728425 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-67284252019-09-18 NMR-based metabolite studies with (15)N amino acids Ramirez, Benjamin Durst, Matthew A. Lavie, Arnon Caffrey, Michael Sci Rep Article (15)N labeled amino acids are routinely used to label proteins or nucleic acids for study by NMR. However, NMR studies of (15)N labeled amino acids in metabolite studies have not been pursued extensively, presumably due to line broadening present under standard experimental conditions. In this work, we show that lowering the temperature to −5 °C allows facile characterization of (15)N-labeled amino acids. Further, we show that this technique can be exploited to measure (15)NH(3) produced in an enzyme catalyzed reaction and the transport and metabolism of individual amino acids in mammalian cell culture. With respect to (13)C-labeled amino acids, (15)N-labeled amino acids are less costly and enable direct characterization of nitrogen metabolism in complex biological systems by NMR. In summary, the present work significantly expands the metabolite pools and their reactions for study by NMR. Nature Publishing Group UK 2019-09-05 /pmc/articles/PMC6728425/ /pubmed/31488858 http://dx.doi.org/10.1038/s41598-019-49208-8 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Ramirez, Benjamin Durst, Matthew A. Lavie, Arnon Caffrey, Michael NMR-based metabolite studies with (15)N amino acids |
title | NMR-based metabolite studies with (15)N amino acids |
title_full | NMR-based metabolite studies with (15)N amino acids |
title_fullStr | NMR-based metabolite studies with (15)N amino acids |
title_full_unstemmed | NMR-based metabolite studies with (15)N amino acids |
title_short | NMR-based metabolite studies with (15)N amino acids |
title_sort | nmr-based metabolite studies with (15)n amino acids |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6728425/ https://www.ncbi.nlm.nih.gov/pubmed/31488858 http://dx.doi.org/10.1038/s41598-019-49208-8 |
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