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NMR-based metabolite studies with (15)N amino acids

(15)N labeled amino acids are routinely used to label proteins or nucleic acids for study by NMR. However, NMR studies of (15)N labeled amino acids in metabolite studies have not been pursued extensively, presumably due to line broadening present under standard experimental conditions. In this work,...

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Detalles Bibliográficos
Autores principales: Ramirez, Benjamin, Durst, Matthew A., Lavie, Arnon, Caffrey, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6728425/
https://www.ncbi.nlm.nih.gov/pubmed/31488858
http://dx.doi.org/10.1038/s41598-019-49208-8
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author Ramirez, Benjamin
Durst, Matthew A.
Lavie, Arnon
Caffrey, Michael
author_facet Ramirez, Benjamin
Durst, Matthew A.
Lavie, Arnon
Caffrey, Michael
author_sort Ramirez, Benjamin
collection PubMed
description (15)N labeled amino acids are routinely used to label proteins or nucleic acids for study by NMR. However, NMR studies of (15)N labeled amino acids in metabolite studies have not been pursued extensively, presumably due to line broadening present under standard experimental conditions. In this work, we show that lowering the temperature to −5 °C allows facile characterization of (15)N-labeled amino acids. Further, we show that this technique can be exploited to measure (15)NH(3) produced in an enzyme catalyzed reaction and the transport and metabolism of individual amino acids in mammalian cell culture. With respect to (13)C-labeled amino acids, (15)N-labeled amino acids are less costly and enable direct characterization of nitrogen metabolism in complex biological systems by NMR. In summary, the present work significantly expands the metabolite pools and their reactions for study by NMR.
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spelling pubmed-67284252019-09-18 NMR-based metabolite studies with (15)N amino acids Ramirez, Benjamin Durst, Matthew A. Lavie, Arnon Caffrey, Michael Sci Rep Article (15)N labeled amino acids are routinely used to label proteins or nucleic acids for study by NMR. However, NMR studies of (15)N labeled amino acids in metabolite studies have not been pursued extensively, presumably due to line broadening present under standard experimental conditions. In this work, we show that lowering the temperature to −5 °C allows facile characterization of (15)N-labeled amino acids. Further, we show that this technique can be exploited to measure (15)NH(3) produced in an enzyme catalyzed reaction and the transport and metabolism of individual amino acids in mammalian cell culture. With respect to (13)C-labeled amino acids, (15)N-labeled amino acids are less costly and enable direct characterization of nitrogen metabolism in complex biological systems by NMR. In summary, the present work significantly expands the metabolite pools and their reactions for study by NMR. Nature Publishing Group UK 2019-09-05 /pmc/articles/PMC6728425/ /pubmed/31488858 http://dx.doi.org/10.1038/s41598-019-49208-8 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Ramirez, Benjamin
Durst, Matthew A.
Lavie, Arnon
Caffrey, Michael
NMR-based metabolite studies with (15)N amino acids
title NMR-based metabolite studies with (15)N amino acids
title_full NMR-based metabolite studies with (15)N amino acids
title_fullStr NMR-based metabolite studies with (15)N amino acids
title_full_unstemmed NMR-based metabolite studies with (15)N amino acids
title_short NMR-based metabolite studies with (15)N amino acids
title_sort nmr-based metabolite studies with (15)n amino acids
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6728425/
https://www.ncbi.nlm.nih.gov/pubmed/31488858
http://dx.doi.org/10.1038/s41598-019-49208-8
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