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A framework for meta-analysis of prediction model studies with binary and time-to-event outcomes
It is widely recommended that any developed—diagnostic or prognostic—prediction model is externally validated in terms of its predictive performance measured by calibration and discrimination. When multiple validations have been performed, a systematic review followed by a formal meta-analysis helps...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6728752/ https://www.ncbi.nlm.nih.gov/pubmed/30032705 http://dx.doi.org/10.1177/0962280218785504 |
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author | Debray, Thomas PA Damen, Johanna AAG Riley, Richard D Snell, Kym Reitsma, Johannes B Hooft, Lotty Collins, Gary S Moons, Karel GM |
author_facet | Debray, Thomas PA Damen, Johanna AAG Riley, Richard D Snell, Kym Reitsma, Johannes B Hooft, Lotty Collins, Gary S Moons, Karel GM |
author_sort | Debray, Thomas PA |
collection | PubMed |
description | It is widely recommended that any developed—diagnostic or prognostic—prediction model is externally validated in terms of its predictive performance measured by calibration and discrimination. When multiple validations have been performed, a systematic review followed by a formal meta-analysis helps to summarize overall performance across multiple settings, and reveals under which circumstances the model performs suboptimal (alternative poorer) and may need adjustment. We discuss how to undertake meta-analysis of the performance of prediction models with either a binary or a time-to-event outcome. We address how to deal with incomplete availability of study-specific results (performance estimates and their precision), and how to produce summary estimates of the c-statistic, the observed:expected ratio and the calibration slope. Furthermore, we discuss the implementation of frequentist and Bayesian meta-analysis methods, and propose novel empirically-based prior distributions to improve estimation of between-study heterogeneity in small samples. Finally, we illustrate all methods using two examples: meta-analysis of the predictive performance of EuroSCORE II and of the Framingham Risk Score. All examples and meta-analysis models have been implemented in our newly developed R package “metamisc”. |
format | Online Article Text |
id | pubmed-6728752 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-67287522019-10-03 A framework for meta-analysis of prediction model studies with binary and time-to-event outcomes Debray, Thomas PA Damen, Johanna AAG Riley, Richard D Snell, Kym Reitsma, Johannes B Hooft, Lotty Collins, Gary S Moons, Karel GM Stat Methods Med Res Regular Articles It is widely recommended that any developed—diagnostic or prognostic—prediction model is externally validated in terms of its predictive performance measured by calibration and discrimination. When multiple validations have been performed, a systematic review followed by a formal meta-analysis helps to summarize overall performance across multiple settings, and reveals under which circumstances the model performs suboptimal (alternative poorer) and may need adjustment. We discuss how to undertake meta-analysis of the performance of prediction models with either a binary or a time-to-event outcome. We address how to deal with incomplete availability of study-specific results (performance estimates and their precision), and how to produce summary estimates of the c-statistic, the observed:expected ratio and the calibration slope. Furthermore, we discuss the implementation of frequentist and Bayesian meta-analysis methods, and propose novel empirically-based prior distributions to improve estimation of between-study heterogeneity in small samples. Finally, we illustrate all methods using two examples: meta-analysis of the predictive performance of EuroSCORE II and of the Framingham Risk Score. All examples and meta-analysis models have been implemented in our newly developed R package “metamisc”. SAGE Publications 2018-07-23 2019-09 /pmc/articles/PMC6728752/ /pubmed/30032705 http://dx.doi.org/10.1177/0962280218785504 Text en © The Author(s) 2018 http://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (http://www.creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Regular Articles Debray, Thomas PA Damen, Johanna AAG Riley, Richard D Snell, Kym Reitsma, Johannes B Hooft, Lotty Collins, Gary S Moons, Karel GM A framework for meta-analysis of prediction model studies with binary and time-to-event outcomes |
title | A framework for meta-analysis of prediction model studies with binary
and time-to-event outcomes |
title_full | A framework for meta-analysis of prediction model studies with binary
and time-to-event outcomes |
title_fullStr | A framework for meta-analysis of prediction model studies with binary
and time-to-event outcomes |
title_full_unstemmed | A framework for meta-analysis of prediction model studies with binary
and time-to-event outcomes |
title_short | A framework for meta-analysis of prediction model studies with binary
and time-to-event outcomes |
title_sort | framework for meta-analysis of prediction model studies with binary
and time-to-event outcomes |
topic | Regular Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6728752/ https://www.ncbi.nlm.nih.gov/pubmed/30032705 http://dx.doi.org/10.1177/0962280218785504 |
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