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A streamlined and predominantly diploid genome in the tiny marine green alga Chloropicon primus
Tiny marine green algae issued from two deep branches of the Chlorophyta, the Mamiellophyceae and Chloropicophyceae, dominate different regions of the oceans and play key roles in planktonic communities. Considering that the Mamiellophyceae is the sole lineage of prasinophyte algae that has been int...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6731263/ https://www.ncbi.nlm.nih.gov/pubmed/31492891 http://dx.doi.org/10.1038/s41467-019-12014-x |
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author | Lemieux, Claude Turmel, Monique Otis, Christian Pombert, Jean-François |
author_facet | Lemieux, Claude Turmel, Monique Otis, Christian Pombert, Jean-François |
author_sort | Lemieux, Claude |
collection | PubMed |
description | Tiny marine green algae issued from two deep branches of the Chlorophyta, the Mamiellophyceae and Chloropicophyceae, dominate different regions of the oceans and play key roles in planktonic communities. Considering that the Mamiellophyceae is the sole lineage of prasinophyte algae that has been intensively investigated, the extent to which these two algal groups differ in their metabolic capacities and cellular processes is currently unknown. To address this gap of knowledge, we investigate here the nuclear genome sequence of a member of the Chloropicophyceae, Chloropicon primus. Among the main biological insights that emerge from this 17.4 Mb genome, we find an unexpected diploid structure for most chromosomes and a propionate detoxification pathway in green algae. Our results support the notion that separate events of genome minimization, which entailed differential losses of genes/pathways, have occurred in the Chloropicophyceae and Mamiellophyceae, suggesting different strategies of adaptation to oceanic environments. |
format | Online Article Text |
id | pubmed-6731263 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-67312632019-09-09 A streamlined and predominantly diploid genome in the tiny marine green alga Chloropicon primus Lemieux, Claude Turmel, Monique Otis, Christian Pombert, Jean-François Nat Commun Article Tiny marine green algae issued from two deep branches of the Chlorophyta, the Mamiellophyceae and Chloropicophyceae, dominate different regions of the oceans and play key roles in planktonic communities. Considering that the Mamiellophyceae is the sole lineage of prasinophyte algae that has been intensively investigated, the extent to which these two algal groups differ in their metabolic capacities and cellular processes is currently unknown. To address this gap of knowledge, we investigate here the nuclear genome sequence of a member of the Chloropicophyceae, Chloropicon primus. Among the main biological insights that emerge from this 17.4 Mb genome, we find an unexpected diploid structure for most chromosomes and a propionate detoxification pathway in green algae. Our results support the notion that separate events of genome minimization, which entailed differential losses of genes/pathways, have occurred in the Chloropicophyceae and Mamiellophyceae, suggesting different strategies of adaptation to oceanic environments. Nature Publishing Group UK 2019-09-06 /pmc/articles/PMC6731263/ /pubmed/31492891 http://dx.doi.org/10.1038/s41467-019-12014-x Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Lemieux, Claude Turmel, Monique Otis, Christian Pombert, Jean-François A streamlined and predominantly diploid genome in the tiny marine green alga Chloropicon primus |
title | A streamlined and predominantly diploid genome in the tiny marine green alga Chloropicon primus |
title_full | A streamlined and predominantly diploid genome in the tiny marine green alga Chloropicon primus |
title_fullStr | A streamlined and predominantly diploid genome in the tiny marine green alga Chloropicon primus |
title_full_unstemmed | A streamlined and predominantly diploid genome in the tiny marine green alga Chloropicon primus |
title_short | A streamlined and predominantly diploid genome in the tiny marine green alga Chloropicon primus |
title_sort | streamlined and predominantly diploid genome in the tiny marine green alga chloropicon primus |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6731263/ https://www.ncbi.nlm.nih.gov/pubmed/31492891 http://dx.doi.org/10.1038/s41467-019-12014-x |
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