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miR-145 supports cancer cell survival and shows association with DDR genes, methylation pattern, and epithelial to mesenchymal transition

BACKGROUND: Despite several reports describing the dual role of miR-145 as an oncogene and a tumor suppressor in cancer, not much has been resolved and understood. METHOD: In this study, the potential targets of miR-145 were identified bio-informatically using different target prediction tools. The...

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Autores principales: Manvati, Siddharth, Mangalhara, Kailash Chandra, Kalaiarasan, Ponnuswamy, Chopra, Rupali, Agarwal, Gaurav, Kumar, Rakesh, Saini, Sunil Kumar, Kaushik, Monika, Arora, Ankita, Kumari, Usha, Bamezai, Rameshwar Nath Koul, Dhar, Pawan Kumar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6731614/
https://www.ncbi.nlm.nih.gov/pubmed/31516387
http://dx.doi.org/10.1186/s12935-019-0933-8
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author Manvati, Siddharth
Mangalhara, Kailash Chandra
Kalaiarasan, Ponnuswamy
Chopra, Rupali
Agarwal, Gaurav
Kumar, Rakesh
Saini, Sunil Kumar
Kaushik, Monika
Arora, Ankita
Kumari, Usha
Bamezai, Rameshwar Nath Koul
Dhar, Pawan Kumar
author_facet Manvati, Siddharth
Mangalhara, Kailash Chandra
Kalaiarasan, Ponnuswamy
Chopra, Rupali
Agarwal, Gaurav
Kumar, Rakesh
Saini, Sunil Kumar
Kaushik, Monika
Arora, Ankita
Kumari, Usha
Bamezai, Rameshwar Nath Koul
Dhar, Pawan Kumar
author_sort Manvati, Siddharth
collection PubMed
description BACKGROUND: Despite several reports describing the dual role of miR-145 as an oncogene and a tumor suppressor in cancer, not much has been resolved and understood. METHOD: In this study, the potential targets of miR-145 were identified bio-informatically using different target prediction tools. The identified target genes were validated in vitro by dual luciferase assay. Wound healing and soft agar colony assay assessed cell proliferation and migration. miR-145 expression level was measured quantitatively by RT-PCR at different stages of breast tumor. Western blot was used to verify the role of miR-145 in EMT transition using key marker proteins. RESULT: Wound healing and soft agar colony assays, using miR-145 over-expressing stably transfected MCF7 cells, unraveled its role as a pro-proliferation candidate in cancerous cells. The association between miR-145 over-expression and differential methylation patterns in representative target genes (DR5, BCL2, TP53, RNF8, TIP60, CHK2, and DCR2) supported the inference drawn. These in vitro observations were validated in a representative set of nodal positive tumors of stage 3 and 4 depicting higher miR-145 expression as compared to early stages. Further, the role of miR-145 in epithelial–mesenchymal (EMT) transition found support through the observation of two key markers, Vimentin and ALDL, where a positive correlation with Vimentin protein and a negative correlation with ALDL mRNA expression were observed. CONCLUSION: Our results demonstrate miR-145 as a pro-cancerous candidate, evident from the phenotypes of aggressive cellular proliferation, epithelial to mesenchymal transition, hypermethylation of CpG sites in DDR and apoptotic genes and upregulation of miR-145 in later stages of tumor tissues.
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spelling pubmed-67316142019-09-12 miR-145 supports cancer cell survival and shows association with DDR genes, methylation pattern, and epithelial to mesenchymal transition Manvati, Siddharth Mangalhara, Kailash Chandra Kalaiarasan, Ponnuswamy Chopra, Rupali Agarwal, Gaurav Kumar, Rakesh Saini, Sunil Kumar Kaushik, Monika Arora, Ankita Kumari, Usha Bamezai, Rameshwar Nath Koul Dhar, Pawan Kumar Cancer Cell Int Primary Research BACKGROUND: Despite several reports describing the dual role of miR-145 as an oncogene and a tumor suppressor in cancer, not much has been resolved and understood. METHOD: In this study, the potential targets of miR-145 were identified bio-informatically using different target prediction tools. The identified target genes were validated in vitro by dual luciferase assay. Wound healing and soft agar colony assay assessed cell proliferation and migration. miR-145 expression level was measured quantitatively by RT-PCR at different stages of breast tumor. Western blot was used to verify the role of miR-145 in EMT transition using key marker proteins. RESULT: Wound healing and soft agar colony assays, using miR-145 over-expressing stably transfected MCF7 cells, unraveled its role as a pro-proliferation candidate in cancerous cells. The association between miR-145 over-expression and differential methylation patterns in representative target genes (DR5, BCL2, TP53, RNF8, TIP60, CHK2, and DCR2) supported the inference drawn. These in vitro observations were validated in a representative set of nodal positive tumors of stage 3 and 4 depicting higher miR-145 expression as compared to early stages. Further, the role of miR-145 in epithelial–mesenchymal (EMT) transition found support through the observation of two key markers, Vimentin and ALDL, where a positive correlation with Vimentin protein and a negative correlation with ALDL mRNA expression were observed. CONCLUSION: Our results demonstrate miR-145 as a pro-cancerous candidate, evident from the phenotypes of aggressive cellular proliferation, epithelial to mesenchymal transition, hypermethylation of CpG sites in DDR and apoptotic genes and upregulation of miR-145 in later stages of tumor tissues. BioMed Central 2019-09-06 /pmc/articles/PMC6731614/ /pubmed/31516387 http://dx.doi.org/10.1186/s12935-019-0933-8 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Primary Research
Manvati, Siddharth
Mangalhara, Kailash Chandra
Kalaiarasan, Ponnuswamy
Chopra, Rupali
Agarwal, Gaurav
Kumar, Rakesh
Saini, Sunil Kumar
Kaushik, Monika
Arora, Ankita
Kumari, Usha
Bamezai, Rameshwar Nath Koul
Dhar, Pawan Kumar
miR-145 supports cancer cell survival and shows association with DDR genes, methylation pattern, and epithelial to mesenchymal transition
title miR-145 supports cancer cell survival and shows association with DDR genes, methylation pattern, and epithelial to mesenchymal transition
title_full miR-145 supports cancer cell survival and shows association with DDR genes, methylation pattern, and epithelial to mesenchymal transition
title_fullStr miR-145 supports cancer cell survival and shows association with DDR genes, methylation pattern, and epithelial to mesenchymal transition
title_full_unstemmed miR-145 supports cancer cell survival and shows association with DDR genes, methylation pattern, and epithelial to mesenchymal transition
title_short miR-145 supports cancer cell survival and shows association with DDR genes, methylation pattern, and epithelial to mesenchymal transition
title_sort mir-145 supports cancer cell survival and shows association with ddr genes, methylation pattern, and epithelial to mesenchymal transition
topic Primary Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6731614/
https://www.ncbi.nlm.nih.gov/pubmed/31516387
http://dx.doi.org/10.1186/s12935-019-0933-8
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