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Machine Learning to Identify Dialysis Patients at High Death Risk

INTRODUCTION: Given the high mortality rate within the first year of dialysis initiation, an accurate estimation of postdialysis mortality could help patients and clinicians in decision making about initiation of dialysis. We aimed to use machine learning (ML) by incorporating complex information fr...

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Autores principales: Akbilgic, Oguz, Obi, Yoshitsugu, Potukuchi, Praveen K., Karabayir, Ibrahim, Nguyen, Danh V., Soohoo, Melissa, Streja, Elani, Molnar, Miklos Z., Rhee, Connie M., Kalantar-Zadeh, Kamyar, Kovesdy, Csaba P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6732773/
https://www.ncbi.nlm.nih.gov/pubmed/31517141
http://dx.doi.org/10.1016/j.ekir.2019.06.009
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author Akbilgic, Oguz
Obi, Yoshitsugu
Potukuchi, Praveen K.
Karabayir, Ibrahim
Nguyen, Danh V.
Soohoo, Melissa
Streja, Elani
Molnar, Miklos Z.
Rhee, Connie M.
Kalantar-Zadeh, Kamyar
Kovesdy, Csaba P.
author_facet Akbilgic, Oguz
Obi, Yoshitsugu
Potukuchi, Praveen K.
Karabayir, Ibrahim
Nguyen, Danh V.
Soohoo, Melissa
Streja, Elani
Molnar, Miklos Z.
Rhee, Connie M.
Kalantar-Zadeh, Kamyar
Kovesdy, Csaba P.
author_sort Akbilgic, Oguz
collection PubMed
description INTRODUCTION: Given the high mortality rate within the first year of dialysis initiation, an accurate estimation of postdialysis mortality could help patients and clinicians in decision making about initiation of dialysis. We aimed to use machine learning (ML) by incorporating complex information from electronic health records to predict patients at risk for postdialysis short-term mortality. METHODS: This study was carried out on a contemporary cohort of 27,615 US veterans with incident end-stage renal disease (ESRD). We implemented a random forest method on 49 variables obtained before dialysis transition to predict outcomes of 30-, 90-, 180-, and 365-day all-cause mortality after dialysis initiation. RESULTS: The mean (±SD) age of our cohort was 68.7 ± 11.2 years, 98.1% of patients were men, 29.4% were African American, and 71.4% were diabetic. The final random forest model provided C-statistics (95% confidence intervals) of 0.7185 (0.6994–0.7377), 0.7446 (0.7346–0.7546), 0.7504 (0.7425–0.7583), and 0.7488 (0.7421–0.7554) for predicting risk of death within the 4 different time windows. The models showed good internal validity and replicated well in patients with various demographic and clinical characteristics and provided similar or better performance compared with other ML algorithms. Results may not be generalizable to non-veterans. Use of predictors available in electronic medical records has limited the assessment of number of predictors. CONCLUSION: We implemented and ML-based method to accurately predict short-term postdialysis mortality in patients with incident ESRD. Our models could aid patients and clinicians in better decision making about the best course of action in patients approaching ESRD.
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spelling pubmed-67327732019-09-12 Machine Learning to Identify Dialysis Patients at High Death Risk Akbilgic, Oguz Obi, Yoshitsugu Potukuchi, Praveen K. Karabayir, Ibrahim Nguyen, Danh V. Soohoo, Melissa Streja, Elani Molnar, Miklos Z. Rhee, Connie M. Kalantar-Zadeh, Kamyar Kovesdy, Csaba P. Kidney Int Rep Clinical Research INTRODUCTION: Given the high mortality rate within the first year of dialysis initiation, an accurate estimation of postdialysis mortality could help patients and clinicians in decision making about initiation of dialysis. We aimed to use machine learning (ML) by incorporating complex information from electronic health records to predict patients at risk for postdialysis short-term mortality. METHODS: This study was carried out on a contemporary cohort of 27,615 US veterans with incident end-stage renal disease (ESRD). We implemented a random forest method on 49 variables obtained before dialysis transition to predict outcomes of 30-, 90-, 180-, and 365-day all-cause mortality after dialysis initiation. RESULTS: The mean (±SD) age of our cohort was 68.7 ± 11.2 years, 98.1% of patients were men, 29.4% were African American, and 71.4% were diabetic. The final random forest model provided C-statistics (95% confidence intervals) of 0.7185 (0.6994–0.7377), 0.7446 (0.7346–0.7546), 0.7504 (0.7425–0.7583), and 0.7488 (0.7421–0.7554) for predicting risk of death within the 4 different time windows. The models showed good internal validity and replicated well in patients with various demographic and clinical characteristics and provided similar or better performance compared with other ML algorithms. Results may not be generalizable to non-veterans. Use of predictors available in electronic medical records has limited the assessment of number of predictors. CONCLUSION: We implemented and ML-based method to accurately predict short-term postdialysis mortality in patients with incident ESRD. Our models could aid patients and clinicians in better decision making about the best course of action in patients approaching ESRD. Elsevier 2019-06-22 /pmc/articles/PMC6732773/ /pubmed/31517141 http://dx.doi.org/10.1016/j.ekir.2019.06.009 Text en http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Clinical Research
Akbilgic, Oguz
Obi, Yoshitsugu
Potukuchi, Praveen K.
Karabayir, Ibrahim
Nguyen, Danh V.
Soohoo, Melissa
Streja, Elani
Molnar, Miklos Z.
Rhee, Connie M.
Kalantar-Zadeh, Kamyar
Kovesdy, Csaba P.
Machine Learning to Identify Dialysis Patients at High Death Risk
title Machine Learning to Identify Dialysis Patients at High Death Risk
title_full Machine Learning to Identify Dialysis Patients at High Death Risk
title_fullStr Machine Learning to Identify Dialysis Patients at High Death Risk
title_full_unstemmed Machine Learning to Identify Dialysis Patients at High Death Risk
title_short Machine Learning to Identify Dialysis Patients at High Death Risk
title_sort machine learning to identify dialysis patients at high death risk
topic Clinical Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6732773/
https://www.ncbi.nlm.nih.gov/pubmed/31517141
http://dx.doi.org/10.1016/j.ekir.2019.06.009
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