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Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage

BACKGROUND: Biobank samples stored in biobanks give researchers and respiratory healthcare institutions access to datasets of analytes valuable for both diagnostic and research practices. The usefulness of these samples in clinical decision-making is highly dependent on their quality and integrity....

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Autores principales: Malm, Johan, Fehniger, Thomas E, Danmyr, Pia, Végvári, Ákos, Welinder, Charlotte, Lindberg, Henrik, Upton, Paul, Carter, Stephanie, Appelqvist, Roger, Sjödin, Karin, Wieslander, Elisabet, Dahlbäck, Magnus, Rezeli, Melinda, Erlinge, David, Marko-Varga, György
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6733428/
https://www.ncbi.nlm.nih.gov/pubmed/27234395
http://dx.doi.org/10.1186/2213-0802-1-14
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author Malm, Johan
Fehniger, Thomas E
Danmyr, Pia
Végvári, Ákos
Welinder, Charlotte
Lindberg, Henrik
Upton, Paul
Carter, Stephanie
Appelqvist, Roger
Sjödin, Karin
Wieslander, Elisabet
Dahlbäck, Magnus
Rezeli, Melinda
Erlinge, David
Marko-Varga, György
author_facet Malm, Johan
Fehniger, Thomas E
Danmyr, Pia
Végvári, Ákos
Welinder, Charlotte
Lindberg, Henrik
Upton, Paul
Carter, Stephanie
Appelqvist, Roger
Sjödin, Karin
Wieslander, Elisabet
Dahlbäck, Magnus
Rezeli, Melinda
Erlinge, David
Marko-Varga, György
author_sort Malm, Johan
collection PubMed
description BACKGROUND: Biobank samples stored in biobanks give researchers and respiratory healthcare institutions access to datasets of analytes valuable for both diagnostic and research practices. The usefulness of these samples in clinical decision-making is highly dependent on their quality and integrity. New procedures that better preserve sample integrity and reduce degradation are being developed to meet the needs of both present and future biobanking. Hereby we present an automatic sample workflow scheme that is designed to handle high numbers of blood samples. METHODS: Blood fractions are aliquoted, heat sealed using novel technology, and stored in 384 tube high-density sample arrays. RESULTS: The newly developed 384 biobank rack system is especially suited for preserving identical small aliquots. We provide data on robotic processing of clinical samples at −80°C, following initial processing, analysis and shipping between laboratories throughout Europe. Subsequent to unpacking, re-sorting, and storage at these sites, the samples have been returned for analysis. Biomarker analysis of 13 common tests in the clinical chemistry unit of the hospital provides evidence of qualitative and stable logistics using the 384-sample tube system. CONCLUSIONS: This technology development allows rapid access to a given sample in the frozen archive while maintaining individual sample integrity with sample tube confinement and quality management. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/2213-0802-1-14) contains supplementary material, which is available to authorized users.
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spelling pubmed-67334282019-09-09 Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage Malm, Johan Fehniger, Thomas E Danmyr, Pia Végvári, Ákos Welinder, Charlotte Lindberg, Henrik Upton, Paul Carter, Stephanie Appelqvist, Roger Sjödin, Karin Wieslander, Elisabet Dahlbäck, Magnus Rezeli, Melinda Erlinge, David Marko-Varga, György Transl Respir Med Research BACKGROUND: Biobank samples stored in biobanks give researchers and respiratory healthcare institutions access to datasets of analytes valuable for both diagnostic and research practices. The usefulness of these samples in clinical decision-making is highly dependent on their quality and integrity. New procedures that better preserve sample integrity and reduce degradation are being developed to meet the needs of both present and future biobanking. Hereby we present an automatic sample workflow scheme that is designed to handle high numbers of blood samples. METHODS: Blood fractions are aliquoted, heat sealed using novel technology, and stored in 384 tube high-density sample arrays. RESULTS: The newly developed 384 biobank rack system is especially suited for preserving identical small aliquots. We provide data on robotic processing of clinical samples at −80°C, following initial processing, analysis and shipping between laboratories throughout Europe. Subsequent to unpacking, re-sorting, and storage at these sites, the samples have been returned for analysis. Biomarker analysis of 13 common tests in the clinical chemistry unit of the hospital provides evidence of qualitative and stable logistics using the 384-sample tube system. CONCLUSIONS: This technology development allows rapid access to a given sample in the frozen archive while maintaining individual sample integrity with sample tube confinement and quality management. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/2213-0802-1-14) contains supplementary material, which is available to authorized users. Springer Berlin Heidelberg 2013-08-30 /pmc/articles/PMC6733428/ /pubmed/27234395 http://dx.doi.org/10.1186/2213-0802-1-14 Text en © Malm et al.; licensee Springer. 2013 This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Malm, Johan
Fehniger, Thomas E
Danmyr, Pia
Végvári, Ákos
Welinder, Charlotte
Lindberg, Henrik
Upton, Paul
Carter, Stephanie
Appelqvist, Roger
Sjödin, Karin
Wieslander, Elisabet
Dahlbäck, Magnus
Rezeli, Melinda
Erlinge, David
Marko-Varga, György
Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage
title Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage
title_full Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage
title_fullStr Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage
title_full_unstemmed Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage
title_short Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage
title_sort standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6733428/
https://www.ncbi.nlm.nih.gov/pubmed/27234395
http://dx.doi.org/10.1186/2213-0802-1-14
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