Cargando…
Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage
BACKGROUND: Biobank samples stored in biobanks give researchers and respiratory healthcare institutions access to datasets of analytes valuable for both diagnostic and research practices. The usefulness of these samples in clinical decision-making is highly dependent on their quality and integrity....
Autores principales: | , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6733428/ https://www.ncbi.nlm.nih.gov/pubmed/27234395 http://dx.doi.org/10.1186/2213-0802-1-14 |
_version_ | 1783449980495724544 |
---|---|
author | Malm, Johan Fehniger, Thomas E Danmyr, Pia Végvári, Ákos Welinder, Charlotte Lindberg, Henrik Upton, Paul Carter, Stephanie Appelqvist, Roger Sjödin, Karin Wieslander, Elisabet Dahlbäck, Magnus Rezeli, Melinda Erlinge, David Marko-Varga, György |
author_facet | Malm, Johan Fehniger, Thomas E Danmyr, Pia Végvári, Ákos Welinder, Charlotte Lindberg, Henrik Upton, Paul Carter, Stephanie Appelqvist, Roger Sjödin, Karin Wieslander, Elisabet Dahlbäck, Magnus Rezeli, Melinda Erlinge, David Marko-Varga, György |
author_sort | Malm, Johan |
collection | PubMed |
description | BACKGROUND: Biobank samples stored in biobanks give researchers and respiratory healthcare institutions access to datasets of analytes valuable for both diagnostic and research practices. The usefulness of these samples in clinical decision-making is highly dependent on their quality and integrity. New procedures that better preserve sample integrity and reduce degradation are being developed to meet the needs of both present and future biobanking. Hereby we present an automatic sample workflow scheme that is designed to handle high numbers of blood samples. METHODS: Blood fractions are aliquoted, heat sealed using novel technology, and stored in 384 tube high-density sample arrays. RESULTS: The newly developed 384 biobank rack system is especially suited for preserving identical small aliquots. We provide data on robotic processing of clinical samples at −80°C, following initial processing, analysis and shipping between laboratories throughout Europe. Subsequent to unpacking, re-sorting, and storage at these sites, the samples have been returned for analysis. Biomarker analysis of 13 common tests in the clinical chemistry unit of the hospital provides evidence of qualitative and stable logistics using the 384-sample tube system. CONCLUSIONS: This technology development allows rapid access to a given sample in the frozen archive while maintaining individual sample integrity with sample tube confinement and quality management. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/2213-0802-1-14) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6733428 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-67334282019-09-09 Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage Malm, Johan Fehniger, Thomas E Danmyr, Pia Végvári, Ákos Welinder, Charlotte Lindberg, Henrik Upton, Paul Carter, Stephanie Appelqvist, Roger Sjödin, Karin Wieslander, Elisabet Dahlbäck, Magnus Rezeli, Melinda Erlinge, David Marko-Varga, György Transl Respir Med Research BACKGROUND: Biobank samples stored in biobanks give researchers and respiratory healthcare institutions access to datasets of analytes valuable for both diagnostic and research practices. The usefulness of these samples in clinical decision-making is highly dependent on their quality and integrity. New procedures that better preserve sample integrity and reduce degradation are being developed to meet the needs of both present and future biobanking. Hereby we present an automatic sample workflow scheme that is designed to handle high numbers of blood samples. METHODS: Blood fractions are aliquoted, heat sealed using novel technology, and stored in 384 tube high-density sample arrays. RESULTS: The newly developed 384 biobank rack system is especially suited for preserving identical small aliquots. We provide data on robotic processing of clinical samples at −80°C, following initial processing, analysis and shipping between laboratories throughout Europe. Subsequent to unpacking, re-sorting, and storage at these sites, the samples have been returned for analysis. Biomarker analysis of 13 common tests in the clinical chemistry unit of the hospital provides evidence of qualitative and stable logistics using the 384-sample tube system. CONCLUSIONS: This technology development allows rapid access to a given sample in the frozen archive while maintaining individual sample integrity with sample tube confinement and quality management. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/2213-0802-1-14) contains supplementary material, which is available to authorized users. Springer Berlin Heidelberg 2013-08-30 /pmc/articles/PMC6733428/ /pubmed/27234395 http://dx.doi.org/10.1186/2213-0802-1-14 Text en © Malm et al.; licensee Springer. 2013 This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Malm, Johan Fehniger, Thomas E Danmyr, Pia Végvári, Ákos Welinder, Charlotte Lindberg, Henrik Upton, Paul Carter, Stephanie Appelqvist, Roger Sjödin, Karin Wieslander, Elisabet Dahlbäck, Magnus Rezeli, Melinda Erlinge, David Marko-Varga, György Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage |
title | Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage |
title_full | Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage |
title_fullStr | Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage |
title_full_unstemmed | Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage |
title_short | Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage |
title_sort | standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6733428/ https://www.ncbi.nlm.nih.gov/pubmed/27234395 http://dx.doi.org/10.1186/2213-0802-1-14 |
work_keys_str_mv | AT malmjohan standardizationdevelopmentsforlargescalebiobanksinsmokingrelateddiseasesamodelsystemforbloodsampleprocessingandstorage AT fehnigerthomase standardizationdevelopmentsforlargescalebiobanksinsmokingrelateddiseasesamodelsystemforbloodsampleprocessingandstorage AT danmyrpia standardizationdevelopmentsforlargescalebiobanksinsmokingrelateddiseasesamodelsystemforbloodsampleprocessingandstorage AT vegvariakos standardizationdevelopmentsforlargescalebiobanksinsmokingrelateddiseasesamodelsystemforbloodsampleprocessingandstorage AT welindercharlotte standardizationdevelopmentsforlargescalebiobanksinsmokingrelateddiseasesamodelsystemforbloodsampleprocessingandstorage AT lindberghenrik standardizationdevelopmentsforlargescalebiobanksinsmokingrelateddiseasesamodelsystemforbloodsampleprocessingandstorage AT uptonpaul standardizationdevelopmentsforlargescalebiobanksinsmokingrelateddiseasesamodelsystemforbloodsampleprocessingandstorage AT carterstephanie standardizationdevelopmentsforlargescalebiobanksinsmokingrelateddiseasesamodelsystemforbloodsampleprocessingandstorage AT appelqvistroger standardizationdevelopmentsforlargescalebiobanksinsmokingrelateddiseasesamodelsystemforbloodsampleprocessingandstorage AT sjodinkarin standardizationdevelopmentsforlargescalebiobanksinsmokingrelateddiseasesamodelsystemforbloodsampleprocessingandstorage AT wieslanderelisabet standardizationdevelopmentsforlargescalebiobanksinsmokingrelateddiseasesamodelsystemforbloodsampleprocessingandstorage AT dahlbackmagnus standardizationdevelopmentsforlargescalebiobanksinsmokingrelateddiseasesamodelsystemforbloodsampleprocessingandstorage AT rezelimelinda standardizationdevelopmentsforlargescalebiobanksinsmokingrelateddiseasesamodelsystemforbloodsampleprocessingandstorage AT erlingedavid standardizationdevelopmentsforlargescalebiobanksinsmokingrelateddiseasesamodelsystemforbloodsampleprocessingandstorage AT markovargagyorgy standardizationdevelopmentsforlargescalebiobanksinsmokingrelateddiseasesamodelsystemforbloodsampleprocessingandstorage |