Cargando…

Association between rs2303861 polymorphism in CD82 gene and non-alcoholic fatty liver disease: a preliminary case-control study

AIM: To investigate the genetic factors involved in the development of non-alcoholic fatty liver disease (NAFLD) and its sequelae in a Middle Eastern population. METHODS: This genetic case-control association study, conducted in 2018, enrolled 30 patients with NAFLD and 30 control individuals matche...

Descripción completa

Detalles Bibliográficos
Autores principales: Habibzadeh, Parham, Honarvar, Behnam, Silawi, Mohammad, Bahramjahan, Shima, Kazemi, Azar, Faghihi, Mohammad Ali, Lankarani, Kamran
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Croatian Medical Schools 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6734574/
https://www.ncbi.nlm.nih.gov/pubmed/31483122
http://dx.doi.org/10.3325/cmj.2019.60.361
_version_ 1783450175801393152
author Habibzadeh, Parham
Honarvar, Behnam
Silawi, Mohammad
Bahramjahan, Shima
Kazemi, Azar
Faghihi, Mohammad Ali
Lankarani, Kamran
author_facet Habibzadeh, Parham
Honarvar, Behnam
Silawi, Mohammad
Bahramjahan, Shima
Kazemi, Azar
Faghihi, Mohammad Ali
Lankarani, Kamran
author_sort Habibzadeh, Parham
collection PubMed
description AIM: To investigate the genetic factors involved in the development of non-alcoholic fatty liver disease (NAFLD) and its sequelae in a Middle Eastern population. METHODS: This genetic case-control association study, conducted in 2018, enrolled 30 patients with NAFLD and 30 control individuals matched for age, sex, and body mass index. After quality control measures, entire exonic regions of 3654 genes associated with human diseases were sequenced. Allelic association test and enrichment analysis of the significant genetic variants were performed. RESULTS: The association analysis was conducted on 27 NAFLD patients and 28 controls. When Bonferroni correction was applied, NAFLD was significantly associated with rs2303861, a variant located in the CD82 gene (P = 2.49 × 10(−7), adjusted P = 0.0059). When we used Benjamini-Hochberg adjustment for correction, NAFLD was significantly associated with six more variants. Enrichment analysis of the genes corresponding to all the seven variants showed significant enrichment for miR-193b-5p (P = 0.00004, adjusted P = 0.00922). CONCLUSION: A variant on CD82 gene and a miR-193b expression dysregulation may have a role in the development and progression of NAFLD and its sequelae.
format Online
Article
Text
id pubmed-6734574
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Croatian Medical Schools
record_format MEDLINE/PubMed
spelling pubmed-67345742019-09-13 Association between rs2303861 polymorphism in CD82 gene and non-alcoholic fatty liver disease: a preliminary case-control study Habibzadeh, Parham Honarvar, Behnam Silawi, Mohammad Bahramjahan, Shima Kazemi, Azar Faghihi, Mohammad Ali Lankarani, Kamran Croat Med J Research Article AIM: To investigate the genetic factors involved in the development of non-alcoholic fatty liver disease (NAFLD) and its sequelae in a Middle Eastern population. METHODS: This genetic case-control association study, conducted in 2018, enrolled 30 patients with NAFLD and 30 control individuals matched for age, sex, and body mass index. After quality control measures, entire exonic regions of 3654 genes associated with human diseases were sequenced. Allelic association test and enrichment analysis of the significant genetic variants were performed. RESULTS: The association analysis was conducted on 27 NAFLD patients and 28 controls. When Bonferroni correction was applied, NAFLD was significantly associated with rs2303861, a variant located in the CD82 gene (P = 2.49 × 10(−7), adjusted P = 0.0059). When we used Benjamini-Hochberg adjustment for correction, NAFLD was significantly associated with six more variants. Enrichment analysis of the genes corresponding to all the seven variants showed significant enrichment for miR-193b-5p (P = 0.00004, adjusted P = 0.00922). CONCLUSION: A variant on CD82 gene and a miR-193b expression dysregulation may have a role in the development and progression of NAFLD and its sequelae. Croatian Medical Schools 2019-08 /pmc/articles/PMC6734574/ /pubmed/31483122 http://dx.doi.org/10.3325/cmj.2019.60.361 Text en Copyright © 2019 by the Croatian Medical Journal. All rights reserved. http://creativecommons.org/licenses/by/2.5/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Habibzadeh, Parham
Honarvar, Behnam
Silawi, Mohammad
Bahramjahan, Shima
Kazemi, Azar
Faghihi, Mohammad Ali
Lankarani, Kamran
Association between rs2303861 polymorphism in CD82 gene and non-alcoholic fatty liver disease: a preliminary case-control study
title Association between rs2303861 polymorphism in CD82 gene and non-alcoholic fatty liver disease: a preliminary case-control study
title_full Association between rs2303861 polymorphism in CD82 gene and non-alcoholic fatty liver disease: a preliminary case-control study
title_fullStr Association between rs2303861 polymorphism in CD82 gene and non-alcoholic fatty liver disease: a preliminary case-control study
title_full_unstemmed Association between rs2303861 polymorphism in CD82 gene and non-alcoholic fatty liver disease: a preliminary case-control study
title_short Association between rs2303861 polymorphism in CD82 gene and non-alcoholic fatty liver disease: a preliminary case-control study
title_sort association between rs2303861 polymorphism in cd82 gene and non-alcoholic fatty liver disease: a preliminary case-control study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6734574/
https://www.ncbi.nlm.nih.gov/pubmed/31483122
http://dx.doi.org/10.3325/cmj.2019.60.361
work_keys_str_mv AT habibzadehparham associationbetweenrs2303861polymorphismincd82geneandnonalcoholicfattyliverdiseaseapreliminarycasecontrolstudy
AT honarvarbehnam associationbetweenrs2303861polymorphismincd82geneandnonalcoholicfattyliverdiseaseapreliminarycasecontrolstudy
AT silawimohammad associationbetweenrs2303861polymorphismincd82geneandnonalcoholicfattyliverdiseaseapreliminarycasecontrolstudy
AT bahramjahanshima associationbetweenrs2303861polymorphismincd82geneandnonalcoholicfattyliverdiseaseapreliminarycasecontrolstudy
AT kazemiazar associationbetweenrs2303861polymorphismincd82geneandnonalcoholicfattyliverdiseaseapreliminarycasecontrolstudy
AT faghihimohammadali associationbetweenrs2303861polymorphismincd82geneandnonalcoholicfattyliverdiseaseapreliminarycasecontrolstudy
AT lankaranikamran associationbetweenrs2303861polymorphismincd82geneandnonalcoholicfattyliverdiseaseapreliminarycasecontrolstudy