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Biogeographical patterns in soil bacterial communities across the Arctic region
The considerable microbial diversity of soils and key role in biogeochemical cycling have led to growing interest in their global distribution and the impact that environmental change might have at the regional level. In the broadest study of Arctic soil bacterial communities to date, we used high-t...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6736398/ https://www.ncbi.nlm.nih.gov/pubmed/31429869 http://dx.doi.org/10.1093/femsec/fiz128 |
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author | Malard, Lucie A Anwar, Muhammad Z Jacobsen, Carsten S Pearce, David A |
author_facet | Malard, Lucie A Anwar, Muhammad Z Jacobsen, Carsten S Pearce, David A |
author_sort | Malard, Lucie A |
collection | PubMed |
description | The considerable microbial diversity of soils and key role in biogeochemical cycling have led to growing interest in their global distribution and the impact that environmental change might have at the regional level. In the broadest study of Arctic soil bacterial communities to date, we used high-throughput DNA sequencing to investigate the bacterial diversity from 200 independent Arctic soil samples from 43 sites. We quantified the impact of spatial and environmental factors on bacterial community structure using variation partitioning analysis, illustrating a nonrandom distribution across the region. pH was confirmed as the key environmental driver structuring Arctic soil bacterial communities, while total organic carbon (TOC), moisture and conductivity were shown to have little effect. Specialist taxa were more abundant in acidic and alkaline soils while generalist taxa were more abundant in acidoneutral soils. Of the 48 147 bacterial taxa, a core microbiome composed of only 13 taxa that were ubiquitously distributed and present within 95% of samples was identified, illustrating the high potential for endemism in the region. Overall, our results demonstrate the importance of spatial and edaphic factors on the structure of Arctic soil bacterial communities. |
format | Online Article Text |
id | pubmed-6736398 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-67363982019-09-16 Biogeographical patterns in soil bacterial communities across the Arctic region Malard, Lucie A Anwar, Muhammad Z Jacobsen, Carsten S Pearce, David A FEMS Microbiol Ecol Research Article The considerable microbial diversity of soils and key role in biogeochemical cycling have led to growing interest in their global distribution and the impact that environmental change might have at the regional level. In the broadest study of Arctic soil bacterial communities to date, we used high-throughput DNA sequencing to investigate the bacterial diversity from 200 independent Arctic soil samples from 43 sites. We quantified the impact of spatial and environmental factors on bacterial community structure using variation partitioning analysis, illustrating a nonrandom distribution across the region. pH was confirmed as the key environmental driver structuring Arctic soil bacterial communities, while total organic carbon (TOC), moisture and conductivity were shown to have little effect. Specialist taxa were more abundant in acidic and alkaline soils while generalist taxa were more abundant in acidoneutral soils. Of the 48 147 bacterial taxa, a core microbiome composed of only 13 taxa that were ubiquitously distributed and present within 95% of samples was identified, illustrating the high potential for endemism in the region. Overall, our results demonstrate the importance of spatial and edaphic factors on the structure of Arctic soil bacterial communities. Oxford University Press 2019-08-20 /pmc/articles/PMC6736398/ /pubmed/31429869 http://dx.doi.org/10.1093/femsec/fiz128 Text en © FEMS 2019. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Malard, Lucie A Anwar, Muhammad Z Jacobsen, Carsten S Pearce, David A Biogeographical patterns in soil bacterial communities across the Arctic region |
title | Biogeographical patterns in soil bacterial communities across the Arctic region |
title_full | Biogeographical patterns in soil bacterial communities across the Arctic region |
title_fullStr | Biogeographical patterns in soil bacterial communities across the Arctic region |
title_full_unstemmed | Biogeographical patterns in soil bacterial communities across the Arctic region |
title_short | Biogeographical patterns in soil bacterial communities across the Arctic region |
title_sort | biogeographical patterns in soil bacterial communities across the arctic region |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6736398/ https://www.ncbi.nlm.nih.gov/pubmed/31429869 http://dx.doi.org/10.1093/femsec/fiz128 |
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