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Epigenome-wide association study of leukocyte telomere length
Telomere length is associated with age-related diseases and is highly heritable. It is unclear, however, to what extent epigenetic modifications are associated with leukocyte telomere length (LTL). In this study, we conducted a large-scale epigenome-wide association study (EWAS) of LTL using seven l...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6738430/ https://www.ncbi.nlm.nih.gov/pubmed/31461406 http://dx.doi.org/10.18632/aging.102230 |
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author | Lee, Yunsung Sun, Dianjianyi Ori, Anil P.S. Lu, Ake T. Seeboth, Anne Harris, Sarah E. Deary, Ian J. Marioni, Riccardo E. Soerensen, Mette Mengel-From, Jonas Hjelmborg, Jacob Christensen, Kaare Wilson, James G. Levy, Daniel Reiner, Alex P. Chen, Wei Li, Shengxu Harris, Jennifer R. Magnus, Per Aviv, Abraham Jugessur, Astanand Horvath, Steve |
author_facet | Lee, Yunsung Sun, Dianjianyi Ori, Anil P.S. Lu, Ake T. Seeboth, Anne Harris, Sarah E. Deary, Ian J. Marioni, Riccardo E. Soerensen, Mette Mengel-From, Jonas Hjelmborg, Jacob Christensen, Kaare Wilson, James G. Levy, Daniel Reiner, Alex P. Chen, Wei Li, Shengxu Harris, Jennifer R. Magnus, Per Aviv, Abraham Jugessur, Astanand Horvath, Steve |
author_sort | Lee, Yunsung |
collection | PubMed |
description | Telomere length is associated with age-related diseases and is highly heritable. It is unclear, however, to what extent epigenetic modifications are associated with leukocyte telomere length (LTL). In this study, we conducted a large-scale epigenome-wide association study (EWAS) of LTL using seven large cohorts (n=5,713) – the Framingham Heart Study, the Jackson Heart Study, the Women’s Health Initiative, the Bogalusa Heart Study, the Lothian Birth Cohorts of 1921 and 1936, and the Longitudinal Study of Aging Danish Twins. Our stratified analysis suggests that EWAS findings for women of African ancestry may be distinct from those of three other groups: males of African ancestry, and males and females of European ancestry. Using a meta-analysis framework, we identified DNA methylation (DNAm) levels at 823 CpG sites to be significantly associated (P<1E-7) with LTL after adjusting for age, sex, ethnicity, and imputed white blood cell counts. Functional enrichment analyses revealed that these CpG sites are near genes that play a role in circadian rhythm, blood coagulation, and wound healing. Weighted correlation network analysis identified four co-methylation modules associated with LTL, age, and blood cell counts. Overall, this study reveals highly significant relationships between two hallmarks of aging: telomere biology and epigenetic changes. |
format | Online Article Text |
id | pubmed-6738430 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-67384302019-09-16 Epigenome-wide association study of leukocyte telomere length Lee, Yunsung Sun, Dianjianyi Ori, Anil P.S. Lu, Ake T. Seeboth, Anne Harris, Sarah E. Deary, Ian J. Marioni, Riccardo E. Soerensen, Mette Mengel-From, Jonas Hjelmborg, Jacob Christensen, Kaare Wilson, James G. Levy, Daniel Reiner, Alex P. Chen, Wei Li, Shengxu Harris, Jennifer R. Magnus, Per Aviv, Abraham Jugessur, Astanand Horvath, Steve Aging (Albany NY) Research Paper Telomere length is associated with age-related diseases and is highly heritable. It is unclear, however, to what extent epigenetic modifications are associated with leukocyte telomere length (LTL). In this study, we conducted a large-scale epigenome-wide association study (EWAS) of LTL using seven large cohorts (n=5,713) – the Framingham Heart Study, the Jackson Heart Study, the Women’s Health Initiative, the Bogalusa Heart Study, the Lothian Birth Cohorts of 1921 and 1936, and the Longitudinal Study of Aging Danish Twins. Our stratified analysis suggests that EWAS findings for women of African ancestry may be distinct from those of three other groups: males of African ancestry, and males and females of European ancestry. Using a meta-analysis framework, we identified DNA methylation (DNAm) levels at 823 CpG sites to be significantly associated (P<1E-7) with LTL after adjusting for age, sex, ethnicity, and imputed white blood cell counts. Functional enrichment analyses revealed that these CpG sites are near genes that play a role in circadian rhythm, blood coagulation, and wound healing. Weighted correlation network analysis identified four co-methylation modules associated with LTL, age, and blood cell counts. Overall, this study reveals highly significant relationships between two hallmarks of aging: telomere biology and epigenetic changes. Impact Journals 2019-08-26 /pmc/articles/PMC6738430/ /pubmed/31461406 http://dx.doi.org/10.18632/aging.102230 Text en Copyright © 2019 Lee et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC BY 3.0) License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Lee, Yunsung Sun, Dianjianyi Ori, Anil P.S. Lu, Ake T. Seeboth, Anne Harris, Sarah E. Deary, Ian J. Marioni, Riccardo E. Soerensen, Mette Mengel-From, Jonas Hjelmborg, Jacob Christensen, Kaare Wilson, James G. Levy, Daniel Reiner, Alex P. Chen, Wei Li, Shengxu Harris, Jennifer R. Magnus, Per Aviv, Abraham Jugessur, Astanand Horvath, Steve Epigenome-wide association study of leukocyte telomere length |
title | Epigenome-wide association study of leukocyte telomere length |
title_full | Epigenome-wide association study of leukocyte telomere length |
title_fullStr | Epigenome-wide association study of leukocyte telomere length |
title_full_unstemmed | Epigenome-wide association study of leukocyte telomere length |
title_short | Epigenome-wide association study of leukocyte telomere length |
title_sort | epigenome-wide association study of leukocyte telomere length |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6738430/ https://www.ncbi.nlm.nih.gov/pubmed/31461406 http://dx.doi.org/10.18632/aging.102230 |
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