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Super‐resolution for upper abdominal MRI: Acquisition and post‐processing protocol optimization using brain MRI control data and expert reader validation

PURPOSE: Magnetic resonance (MR) cholangiopancreatography (MRCP) is an established specialist method for imaging the upper abdomen and biliary/pancreatic ducts. Due to limitations of either MR image contrast or low through‐plane resolution, patients may require further evaluation with contrast‐enhan...

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Autores principales: Ebner, Michael, Patel, Premal A., Atkinson, David, Caselton, Lucy, Firmin, Louisa, Amin, Zahir, Bainbridge, Alan, De Coppi, Paolo, Taylor, Stuart A., Ourselin, Sébastien, Chouhan, Manil D., Vercauteren, Tom
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6742507/
https://www.ncbi.nlm.nih.gov/pubmed/31264270
http://dx.doi.org/10.1002/mrm.27852
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author Ebner, Michael
Patel, Premal A.
Atkinson, David
Caselton, Lucy
Firmin, Louisa
Amin, Zahir
Bainbridge, Alan
De Coppi, Paolo
Taylor, Stuart A.
Ourselin, Sébastien
Chouhan, Manil D.
Vercauteren, Tom
author_facet Ebner, Michael
Patel, Premal A.
Atkinson, David
Caselton, Lucy
Firmin, Louisa
Amin, Zahir
Bainbridge, Alan
De Coppi, Paolo
Taylor, Stuart A.
Ourselin, Sébastien
Chouhan, Manil D.
Vercauteren, Tom
author_sort Ebner, Michael
collection PubMed
description PURPOSE: Magnetic resonance (MR) cholangiopancreatography (MRCP) is an established specialist method for imaging the upper abdomen and biliary/pancreatic ducts. Due to limitations of either MR image contrast or low through‐plane resolution, patients may require further evaluation with contrast‐enhanced computed tomography (CT) images. However, CT fails to offer the high tissue‐ductal‐vessel contrast‐to‐noise ratio available on T2‐weighted MR imaging. METHODS: MR super‐resolution reconstruction (SRR) frameworks have the potential to provide high‐resolution visualizations from multiple low through‐plane resolution single‐shot T2‐weighted (SST2W) images as currently used during MRCP studies. Here, we (i) optimize the source image acquisition protocols by establishing the ideal number and orientation of SST2W series for MRCP SRR generation, (ii) optimize post‐processing protocols for two motion correction candidate frameworks for MRCP SRR, and (iii) perform an extensive validation of the overall potential of upper abdominal SRR, using four expert readers with subspeciality interest in hepato‐pancreatico‐biliary imaging. RESULTS: Obtained SRRs show demonstrable advantages over traditional SST2W MRCP data in terms of anatomical clarity and subjective radiologists’ preference scores for a range of anatomical regions that are especially critical for the management of cancer patients. CONCLUSIONS: Our results underline the potential of using SRR alongside traditional MRCP data for improved clinical diagnosis.
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spelling pubmed-67425072019-10-07 Super‐resolution for upper abdominal MRI: Acquisition and post‐processing protocol optimization using brain MRI control data and expert reader validation Ebner, Michael Patel, Premal A. Atkinson, David Caselton, Lucy Firmin, Louisa Amin, Zahir Bainbridge, Alan De Coppi, Paolo Taylor, Stuart A. Ourselin, Sébastien Chouhan, Manil D. Vercauteren, Tom Magn Reson Med Full Papers—Computer Processing and Modeling PURPOSE: Magnetic resonance (MR) cholangiopancreatography (MRCP) is an established specialist method for imaging the upper abdomen and biliary/pancreatic ducts. Due to limitations of either MR image contrast or low through‐plane resolution, patients may require further evaluation with contrast‐enhanced computed tomography (CT) images. However, CT fails to offer the high tissue‐ductal‐vessel contrast‐to‐noise ratio available on T2‐weighted MR imaging. METHODS: MR super‐resolution reconstruction (SRR) frameworks have the potential to provide high‐resolution visualizations from multiple low through‐plane resolution single‐shot T2‐weighted (SST2W) images as currently used during MRCP studies. Here, we (i) optimize the source image acquisition protocols by establishing the ideal number and orientation of SST2W series for MRCP SRR generation, (ii) optimize post‐processing protocols for two motion correction candidate frameworks for MRCP SRR, and (iii) perform an extensive validation of the overall potential of upper abdominal SRR, using four expert readers with subspeciality interest in hepato‐pancreatico‐biliary imaging. RESULTS: Obtained SRRs show demonstrable advantages over traditional SST2W MRCP data in terms of anatomical clarity and subjective radiologists’ preference scores for a range of anatomical regions that are especially critical for the management of cancer patients. CONCLUSIONS: Our results underline the potential of using SRR alongside traditional MRCP data for improved clinical diagnosis. John Wiley and Sons Inc. 2019-07-01 2019-11 /pmc/articles/PMC6742507/ /pubmed/31264270 http://dx.doi.org/10.1002/mrm.27852 Text en © 2019 The Authors. Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Full Papers—Computer Processing and Modeling
Ebner, Michael
Patel, Premal A.
Atkinson, David
Caselton, Lucy
Firmin, Louisa
Amin, Zahir
Bainbridge, Alan
De Coppi, Paolo
Taylor, Stuart A.
Ourselin, Sébastien
Chouhan, Manil D.
Vercauteren, Tom
Super‐resolution for upper abdominal MRI: Acquisition and post‐processing protocol optimization using brain MRI control data and expert reader validation
title Super‐resolution for upper abdominal MRI: Acquisition and post‐processing protocol optimization using brain MRI control data and expert reader validation
title_full Super‐resolution for upper abdominal MRI: Acquisition and post‐processing protocol optimization using brain MRI control data and expert reader validation
title_fullStr Super‐resolution for upper abdominal MRI: Acquisition and post‐processing protocol optimization using brain MRI control data and expert reader validation
title_full_unstemmed Super‐resolution for upper abdominal MRI: Acquisition and post‐processing protocol optimization using brain MRI control data and expert reader validation
title_short Super‐resolution for upper abdominal MRI: Acquisition and post‐processing protocol optimization using brain MRI control data and expert reader validation
title_sort super‐resolution for upper abdominal mri: acquisition and post‐processing protocol optimization using brain mri control data and expert reader validation
topic Full Papers—Computer Processing and Modeling
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6742507/
https://www.ncbi.nlm.nih.gov/pubmed/31264270
http://dx.doi.org/10.1002/mrm.27852
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