Complete Coding Sequence of a Chikungunya Virus Strain Imported into Slovenia from Thailand in Late 2018

A case of chikungunya virus infection was imported from Thailand into Slovenia in late 2018. The infection was diagnosed using real-time reverse transcription-PCR, the virus was isolated in cell culture, and the whole genome was sequenced. Phylogenetic analysis of the nearly complete viral genome in...

Descripción completa

Detalles Bibliográficos
Autores principales: Zakotnik, Samo, Korva, Misa, Knap, Nataša, Robnik, Barbara, Gorišek Miksić, Nina, Avšič Županc, Tatjana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2019
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6742785/
https://www.ncbi.nlm.nih.gov/pubmed/31515334
http://dx.doi.org/10.1128/MRA.00581-19
Descripción
Sumario:A case of chikungunya virus infection was imported from Thailand into Slovenia in late 2018. The infection was diagnosed using real-time reverse transcription-PCR, the virus was isolated in cell culture, and the whole genome was sequenced. Phylogenetic analysis of the nearly complete viral genome indicated that the virus belongs to the Indian Ocean lineage but does not possess the A226V mutation in the envelope protein E1.

Ejemplares similares