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PCR-free whole exome sequencing: Cost-effective and efficient in detecting rare mutations
In this study, we describe the development of a PCR-free whole exome sequencing method. Using this method, 2 μg DNA was sufficient for library preparation for whole exome sequencing. Furthermore, the method is simple and makes use of a commercial kit, with additional step of concentrating the captur...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6743761/ https://www.ncbi.nlm.nih.gov/pubmed/31518370 http://dx.doi.org/10.1371/journal.pone.0222562 |
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author | Yamaguchi, Izumi Watanabe, Takashi Ohara, Osamu Hasegawa, Yoshinori |
author_facet | Yamaguchi, Izumi Watanabe, Takashi Ohara, Osamu Hasegawa, Yoshinori |
author_sort | Yamaguchi, Izumi |
collection | PubMed |
description | In this study, we describe the development of a PCR-free whole exome sequencing method. Using this method, 2 μg DNA was sufficient for library preparation for whole exome sequencing. Furthermore, the method is simple and makes use of a commercial kit, with additional step of concentrating the captured library by ethanol precipitation. The accuracy of the PCR-free method was found to be equivalent to that of unique molecular identifier-corrected analysis method, which is the commonly used method to detect rare mutations. Thus, the PCR-free whole exome sequencing method is cost-effective as well as efficient in detecting rare mutations. |
format | Online Article Text |
id | pubmed-6743761 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-67437612019-09-20 PCR-free whole exome sequencing: Cost-effective and efficient in detecting rare mutations Yamaguchi, Izumi Watanabe, Takashi Ohara, Osamu Hasegawa, Yoshinori PLoS One Research Article In this study, we describe the development of a PCR-free whole exome sequencing method. Using this method, 2 μg DNA was sufficient for library preparation for whole exome sequencing. Furthermore, the method is simple and makes use of a commercial kit, with additional step of concentrating the captured library by ethanol precipitation. The accuracy of the PCR-free method was found to be equivalent to that of unique molecular identifier-corrected analysis method, which is the commonly used method to detect rare mutations. Thus, the PCR-free whole exome sequencing method is cost-effective as well as efficient in detecting rare mutations. Public Library of Science 2019-09-13 /pmc/articles/PMC6743761/ /pubmed/31518370 http://dx.doi.org/10.1371/journal.pone.0222562 Text en © 2019 Yamaguchi et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Yamaguchi, Izumi Watanabe, Takashi Ohara, Osamu Hasegawa, Yoshinori PCR-free whole exome sequencing: Cost-effective and efficient in detecting rare mutations |
title | PCR-free whole exome sequencing: Cost-effective and efficient in detecting rare mutations |
title_full | PCR-free whole exome sequencing: Cost-effective and efficient in detecting rare mutations |
title_fullStr | PCR-free whole exome sequencing: Cost-effective and efficient in detecting rare mutations |
title_full_unstemmed | PCR-free whole exome sequencing: Cost-effective and efficient in detecting rare mutations |
title_short | PCR-free whole exome sequencing: Cost-effective and efficient in detecting rare mutations |
title_sort | pcr-free whole exome sequencing: cost-effective and efficient in detecting rare mutations |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6743761/ https://www.ncbi.nlm.nih.gov/pubmed/31518370 http://dx.doi.org/10.1371/journal.pone.0222562 |
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