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Bayesian Random Effect Modeling for analyzing spatial clustering of differential time trends of diarrhea incidences
In 2012, nearly 644,000 people died from diarrhea in sub-Saharan Africa. This is a significant obstacle towards the achievement of the Sustainable Development Goal 3 of ensuring a healthy life and promoting the wellbeing at all ages. To enhance evidence-based site-specific intervention and mitigatio...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6744449/ https://www.ncbi.nlm.nih.gov/pubmed/31519962 http://dx.doi.org/10.1038/s41598-019-49549-4 |
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author | Osei, Frank Badu Stein, Alfred |
author_facet | Osei, Frank Badu Stein, Alfred |
author_sort | Osei, Frank Badu |
collection | PubMed |
description | In 2012, nearly 644,000 people died from diarrhea in sub-Saharan Africa. This is a significant obstacle towards the achievement of the Sustainable Development Goal 3 of ensuring a healthy life and promoting the wellbeing at all ages. To enhance evidence-based site-specific intervention and mitigation strategies, especially in resource-poor countries, we focused on developing differential time trend models for diarrhea. We modeled the logarithm of the unknown risk for each district as a linear function of time with spatially varying effects. We induced correlation between the random intercepts and slopes either by linear functions or bivariate conditional autoregressive (BiCAR) priors. In comparison, models which included correlation between the varying intercepts and slopes outperformed those without. The convolution model with the BiCAR correlation prior was more competitive than the others. The inclusion of correlation between the intercepts and slopes provided an epidemiological value regarding the response of diarrhea infection dynamics to environmental factors in the past and present. We found diarrhea risk to increase by 23% yearly, a rate far exceeding Ghana’s population growth rate of 2.3%. The varying time trends widely varied and clustered, with the majority of districts with at least 80% chance of their rates exceeding the previous years. These findings can be useful for active site-specific evidence-based planning and interventions for diarrhea. |
format | Online Article Text |
id | pubmed-6744449 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-67444492019-09-27 Bayesian Random Effect Modeling for analyzing spatial clustering of differential time trends of diarrhea incidences Osei, Frank Badu Stein, Alfred Sci Rep Article In 2012, nearly 644,000 people died from diarrhea in sub-Saharan Africa. This is a significant obstacle towards the achievement of the Sustainable Development Goal 3 of ensuring a healthy life and promoting the wellbeing at all ages. To enhance evidence-based site-specific intervention and mitigation strategies, especially in resource-poor countries, we focused on developing differential time trend models for diarrhea. We modeled the logarithm of the unknown risk for each district as a linear function of time with spatially varying effects. We induced correlation between the random intercepts and slopes either by linear functions or bivariate conditional autoregressive (BiCAR) priors. In comparison, models which included correlation between the varying intercepts and slopes outperformed those without. The convolution model with the BiCAR correlation prior was more competitive than the others. The inclusion of correlation between the intercepts and slopes provided an epidemiological value regarding the response of diarrhea infection dynamics to environmental factors in the past and present. We found diarrhea risk to increase by 23% yearly, a rate far exceeding Ghana’s population growth rate of 2.3%. The varying time trends widely varied and clustered, with the majority of districts with at least 80% chance of their rates exceeding the previous years. These findings can be useful for active site-specific evidence-based planning and interventions for diarrhea. Nature Publishing Group UK 2019-09-13 /pmc/articles/PMC6744449/ /pubmed/31519962 http://dx.doi.org/10.1038/s41598-019-49549-4 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Osei, Frank Badu Stein, Alfred Bayesian Random Effect Modeling for analyzing spatial clustering of differential time trends of diarrhea incidences |
title | Bayesian Random Effect Modeling for analyzing spatial clustering of differential time trends of diarrhea incidences |
title_full | Bayesian Random Effect Modeling for analyzing spatial clustering of differential time trends of diarrhea incidences |
title_fullStr | Bayesian Random Effect Modeling for analyzing spatial clustering of differential time trends of diarrhea incidences |
title_full_unstemmed | Bayesian Random Effect Modeling for analyzing spatial clustering of differential time trends of diarrhea incidences |
title_short | Bayesian Random Effect Modeling for analyzing spatial clustering of differential time trends of diarrhea incidences |
title_sort | bayesian random effect modeling for analyzing spatial clustering of differential time trends of diarrhea incidences |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6744449/ https://www.ncbi.nlm.nih.gov/pubmed/31519962 http://dx.doi.org/10.1038/s41598-019-49549-4 |
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