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Structured light imaging for breast-conserving surgery, part II: texture analysis and classification

Subdiffuse spatial frequency domain imaging (sd-SFDI) data of 42 freshly excised, bread-loafed tumor resections from breast-conserving surgery (BCS) were evaluated using texture analysis and a machine learning framework for tissue classification. Resections contained 56 regions of interest (RoIs) de...

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Autores principales: Streeter, Samuel S., Maloney, Benjamin W., McClatchy, David M., Jermyn, Michael, Pogue, Brian W., Rizzo, Elizabeth J., Wells, Wendy A., Paulsen, Keith D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Society of Photo-Optical Instrumentation Engineers 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6744928/
https://www.ncbi.nlm.nih.gov/pubmed/31522486
http://dx.doi.org/10.1117/1.JBO.24.9.096003
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author Streeter, Samuel S.
Maloney, Benjamin W.
McClatchy, David M.
Jermyn, Michael
Pogue, Brian W.
Rizzo, Elizabeth J.
Wells, Wendy A.
Paulsen, Keith D.
author_facet Streeter, Samuel S.
Maloney, Benjamin W.
McClatchy, David M.
Jermyn, Michael
Pogue, Brian W.
Rizzo, Elizabeth J.
Wells, Wendy A.
Paulsen, Keith D.
author_sort Streeter, Samuel S.
collection PubMed
description Subdiffuse spatial frequency domain imaging (sd-SFDI) data of 42 freshly excised, bread-loafed tumor resections from breast-conserving surgery (BCS) were evaluated using texture analysis and a machine learning framework for tissue classification. Resections contained 56 regions of interest (RoIs) determined by expert histopathological analysis. RoIs were coregistered with sd-SFDI data and sampled into [Formula: see text] subimage samples of confirmed and homogeneous histological categories. Sd-SFDI reflectance textures were analyzed using gray-level co-occurrence matrix pixel statistics, image primitives, and power spectral density curve parameters. Texture metrics exhibited statistical significance ([Formula: see text]) between three benign and three malignant tissue subtypes. Pairs of benign and malignant subtypes underwent texture-based, binary classification with correlation-based feature selection. Classification performance was evaluated using fivefold cross-validation and feature grid searching. Classification using subdiffuse, monochromatic reflectance (illumination spatial frequency of [Formula: see text] , optical wavelength of [Formula: see text]) achieved accuracies ranging from 0.55 (95% CI: 0.41 to 0.69) to 0.95 (95% CI: 0.90 to 1.00) depending on the benign–malignant diagnosis pair. Texture analysis of sd-SFDI data maintains the spatial context within images, is free of light transport model assumptions, and may provide an alternative, computationally efficient approach for wide field-of-view ([Formula: see text]) BCS tumor margin assessment relative to pixel-based optical scatter or color properties alone.
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spelling pubmed-67449282020-02-04 Structured light imaging for breast-conserving surgery, part II: texture analysis and classification Streeter, Samuel S. Maloney, Benjamin W. McClatchy, David M. Jermyn, Michael Pogue, Brian W. Rizzo, Elizabeth J. Wells, Wendy A. Paulsen, Keith D. J Biomed Opt Imaging Subdiffuse spatial frequency domain imaging (sd-SFDI) data of 42 freshly excised, bread-loafed tumor resections from breast-conserving surgery (BCS) were evaluated using texture analysis and a machine learning framework for tissue classification. Resections contained 56 regions of interest (RoIs) determined by expert histopathological analysis. RoIs were coregistered with sd-SFDI data and sampled into [Formula: see text] subimage samples of confirmed and homogeneous histological categories. Sd-SFDI reflectance textures were analyzed using gray-level co-occurrence matrix pixel statistics, image primitives, and power spectral density curve parameters. Texture metrics exhibited statistical significance ([Formula: see text]) between three benign and three malignant tissue subtypes. Pairs of benign and malignant subtypes underwent texture-based, binary classification with correlation-based feature selection. Classification performance was evaluated using fivefold cross-validation and feature grid searching. Classification using subdiffuse, monochromatic reflectance (illumination spatial frequency of [Formula: see text] , optical wavelength of [Formula: see text]) achieved accuracies ranging from 0.55 (95% CI: 0.41 to 0.69) to 0.95 (95% CI: 0.90 to 1.00) depending on the benign–malignant diagnosis pair. Texture analysis of sd-SFDI data maintains the spatial context within images, is free of light transport model assumptions, and may provide an alternative, computationally efficient approach for wide field-of-view ([Formula: see text]) BCS tumor margin assessment relative to pixel-based optical scatter or color properties alone. Society of Photo-Optical Instrumentation Engineers 2019-09-14 2019-09 /pmc/articles/PMC6744928/ /pubmed/31522486 http://dx.doi.org/10.1117/1.JBO.24.9.096003 Text en © The Authors. Published by SPIE under a Creative Commons Attribution 4.0 Unported License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI.
spellingShingle Imaging
Streeter, Samuel S.
Maloney, Benjamin W.
McClatchy, David M.
Jermyn, Michael
Pogue, Brian W.
Rizzo, Elizabeth J.
Wells, Wendy A.
Paulsen, Keith D.
Structured light imaging for breast-conserving surgery, part II: texture analysis and classification
title Structured light imaging for breast-conserving surgery, part II: texture analysis and classification
title_full Structured light imaging for breast-conserving surgery, part II: texture analysis and classification
title_fullStr Structured light imaging for breast-conserving surgery, part II: texture analysis and classification
title_full_unstemmed Structured light imaging for breast-conserving surgery, part II: texture analysis and classification
title_short Structured light imaging for breast-conserving surgery, part II: texture analysis and classification
title_sort structured light imaging for breast-conserving surgery, part ii: texture analysis and classification
topic Imaging
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6744928/
https://www.ncbi.nlm.nih.gov/pubmed/31522486
http://dx.doi.org/10.1117/1.JBO.24.9.096003
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