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Structured light imaging for breast-conserving surgery, part II: texture analysis and classification
Subdiffuse spatial frequency domain imaging (sd-SFDI) data of 42 freshly excised, bread-loafed tumor resections from breast-conserving surgery (BCS) were evaluated using texture analysis and a machine learning framework for tissue classification. Resections contained 56 regions of interest (RoIs) de...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Society of Photo-Optical Instrumentation Engineers
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6744928/ https://www.ncbi.nlm.nih.gov/pubmed/31522486 http://dx.doi.org/10.1117/1.JBO.24.9.096003 |
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author | Streeter, Samuel S. Maloney, Benjamin W. McClatchy, David M. Jermyn, Michael Pogue, Brian W. Rizzo, Elizabeth J. Wells, Wendy A. Paulsen, Keith D. |
author_facet | Streeter, Samuel S. Maloney, Benjamin W. McClatchy, David M. Jermyn, Michael Pogue, Brian W. Rizzo, Elizabeth J. Wells, Wendy A. Paulsen, Keith D. |
author_sort | Streeter, Samuel S. |
collection | PubMed |
description | Subdiffuse spatial frequency domain imaging (sd-SFDI) data of 42 freshly excised, bread-loafed tumor resections from breast-conserving surgery (BCS) were evaluated using texture analysis and a machine learning framework for tissue classification. Resections contained 56 regions of interest (RoIs) determined by expert histopathological analysis. RoIs were coregistered with sd-SFDI data and sampled into [Formula: see text] subimage samples of confirmed and homogeneous histological categories. Sd-SFDI reflectance textures were analyzed using gray-level co-occurrence matrix pixel statistics, image primitives, and power spectral density curve parameters. Texture metrics exhibited statistical significance ([Formula: see text]) between three benign and three malignant tissue subtypes. Pairs of benign and malignant subtypes underwent texture-based, binary classification with correlation-based feature selection. Classification performance was evaluated using fivefold cross-validation and feature grid searching. Classification using subdiffuse, monochromatic reflectance (illumination spatial frequency of [Formula: see text] , optical wavelength of [Formula: see text]) achieved accuracies ranging from 0.55 (95% CI: 0.41 to 0.69) to 0.95 (95% CI: 0.90 to 1.00) depending on the benign–malignant diagnosis pair. Texture analysis of sd-SFDI data maintains the spatial context within images, is free of light transport model assumptions, and may provide an alternative, computationally efficient approach for wide field-of-view ([Formula: see text]) BCS tumor margin assessment relative to pixel-based optical scatter or color properties alone. |
format | Online Article Text |
id | pubmed-6744928 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Society of Photo-Optical Instrumentation Engineers |
record_format | MEDLINE/PubMed |
spelling | pubmed-67449282020-02-04 Structured light imaging for breast-conserving surgery, part II: texture analysis and classification Streeter, Samuel S. Maloney, Benjamin W. McClatchy, David M. Jermyn, Michael Pogue, Brian W. Rizzo, Elizabeth J. Wells, Wendy A. Paulsen, Keith D. J Biomed Opt Imaging Subdiffuse spatial frequency domain imaging (sd-SFDI) data of 42 freshly excised, bread-loafed tumor resections from breast-conserving surgery (BCS) were evaluated using texture analysis and a machine learning framework for tissue classification. Resections contained 56 regions of interest (RoIs) determined by expert histopathological analysis. RoIs were coregistered with sd-SFDI data and sampled into [Formula: see text] subimage samples of confirmed and homogeneous histological categories. Sd-SFDI reflectance textures were analyzed using gray-level co-occurrence matrix pixel statistics, image primitives, and power spectral density curve parameters. Texture metrics exhibited statistical significance ([Formula: see text]) between three benign and three malignant tissue subtypes. Pairs of benign and malignant subtypes underwent texture-based, binary classification with correlation-based feature selection. Classification performance was evaluated using fivefold cross-validation and feature grid searching. Classification using subdiffuse, monochromatic reflectance (illumination spatial frequency of [Formula: see text] , optical wavelength of [Formula: see text]) achieved accuracies ranging from 0.55 (95% CI: 0.41 to 0.69) to 0.95 (95% CI: 0.90 to 1.00) depending on the benign–malignant diagnosis pair. Texture analysis of sd-SFDI data maintains the spatial context within images, is free of light transport model assumptions, and may provide an alternative, computationally efficient approach for wide field-of-view ([Formula: see text]) BCS tumor margin assessment relative to pixel-based optical scatter or color properties alone. Society of Photo-Optical Instrumentation Engineers 2019-09-14 2019-09 /pmc/articles/PMC6744928/ /pubmed/31522486 http://dx.doi.org/10.1117/1.JBO.24.9.096003 Text en © The Authors. Published by SPIE under a Creative Commons Attribution 4.0 Unported License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI. |
spellingShingle | Imaging Streeter, Samuel S. Maloney, Benjamin W. McClatchy, David M. Jermyn, Michael Pogue, Brian W. Rizzo, Elizabeth J. Wells, Wendy A. Paulsen, Keith D. Structured light imaging for breast-conserving surgery, part II: texture analysis and classification |
title | Structured light imaging for breast-conserving surgery, part II: texture analysis and classification |
title_full | Structured light imaging for breast-conserving surgery, part II: texture analysis and classification |
title_fullStr | Structured light imaging for breast-conserving surgery, part II: texture analysis and classification |
title_full_unstemmed | Structured light imaging for breast-conserving surgery, part II: texture analysis and classification |
title_short | Structured light imaging for breast-conserving surgery, part II: texture analysis and classification |
title_sort | structured light imaging for breast-conserving surgery, part ii: texture analysis and classification |
topic | Imaging |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6744928/ https://www.ncbi.nlm.nih.gov/pubmed/31522486 http://dx.doi.org/10.1117/1.JBO.24.9.096003 |
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