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Association of XPG rs2094258 polymorphism with gastric cancer prognosis

BACKGROUND: The xeroderma pigmentosum group G (XPG) gene at chromosome 13q33 consists of 15 exons, which may be related to the occurrence and development of gastric cancer (GC). AIM: To examine the association of several common single nucleotide polymorphisms (SNPs) of the XPG gene with GC risk and...

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Autores principales: Wang, Xiao-Qin, Terry, Paul D, Li, Yang, Zhang, Yue, Kou, Wen-Jing, Wang, Ming-Xu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Baishideng Publishing Group Inc 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6747292/
https://www.ncbi.nlm.nih.gov/pubmed/31558863
http://dx.doi.org/10.3748/wjg.v25.i34.5152
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author Wang, Xiao-Qin
Terry, Paul D
Li, Yang
Zhang, Yue
Kou, Wen-Jing
Wang, Ming-Xu
author_facet Wang, Xiao-Qin
Terry, Paul D
Li, Yang
Zhang, Yue
Kou, Wen-Jing
Wang, Ming-Xu
author_sort Wang, Xiao-Qin
collection PubMed
description BACKGROUND: The xeroderma pigmentosum group G (XPG) gene at chromosome 13q33 consists of 15 exons, which may be related to the occurrence and development of gastric cancer (GC). AIM: To examine the association of several common single nucleotide polymorphisms (SNPs) of the XPG gene with GC risk and survival. METHODS: Five SNPs of XPG (rs2094258, rs751402, rs873601, rs2296147, and rs1047768) were genotyped by PCR restriction fragment length polymorphism in 956 histologically confirmed GC cases and 1012 controls in North China. GC patients were followed for survival status and, if deceased, cause of death. Logistic regression and Cox regression were used for analysing associations of XPG SNPs with risk of GC and prognosis, respectively. For rs2094258, heterozygous model (CT vs CC), homozygous model (TT vs CC), recessive model (TT vs CT + CC), and dominant model (TT + CT vs CC) were analyzed. RESULTS: None of the examined loci were statistically associated with GC risk, although rs2296147 was marginally associated with GC risk (P = 0.050). GC patients with the rs2094258 CT + CC genotype showed worse survival than those with the TT genotype (log-rank test, P = 0.028), and patients with the CC genotype had a tendency of unfavourable prognosis compared with those with the TT + CT genotype (log-rank test, P = 0.039). The increase in C alleles of rs2094258 [hazard ratio (HR) = 1.19, 95% confidence interval (CI): 1.02-1.45, P = 0.037] were associated with the long-term survival of GC cases. Other risk factors for survival included tumor differentiation (HR = 4.51, 95%CI: 1.99-8.23, P < 0.001), lymphovascular invasion (HR = 1.97, 95%CI: 1.44-3.01, P < 0.001), and use of chemotherapy (HR = 0.81, 95%CI: 0.63-0.98, P = 0.041). CONCLUSION: The XPG rs2094258 polymorphism may be associated with overall survival in GC patients.
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spelling pubmed-67472922019-09-26 Association of XPG rs2094258 polymorphism with gastric cancer prognosis Wang, Xiao-Qin Terry, Paul D Li, Yang Zhang, Yue Kou, Wen-Jing Wang, Ming-Xu World J Gastroenterol Case Control Study BACKGROUND: The xeroderma pigmentosum group G (XPG) gene at chromosome 13q33 consists of 15 exons, which may be related to the occurrence and development of gastric cancer (GC). AIM: To examine the association of several common single nucleotide polymorphisms (SNPs) of the XPG gene with GC risk and survival. METHODS: Five SNPs of XPG (rs2094258, rs751402, rs873601, rs2296147, and rs1047768) were genotyped by PCR restriction fragment length polymorphism in 956 histologically confirmed GC cases and 1012 controls in North China. GC patients were followed for survival status and, if deceased, cause of death. Logistic regression and Cox regression were used for analysing associations of XPG SNPs with risk of GC and prognosis, respectively. For rs2094258, heterozygous model (CT vs CC), homozygous model (TT vs CC), recessive model (TT vs CT + CC), and dominant model (TT + CT vs CC) were analyzed. RESULTS: None of the examined loci were statistically associated with GC risk, although rs2296147 was marginally associated with GC risk (P = 0.050). GC patients with the rs2094258 CT + CC genotype showed worse survival than those with the TT genotype (log-rank test, P = 0.028), and patients with the CC genotype had a tendency of unfavourable prognosis compared with those with the TT + CT genotype (log-rank test, P = 0.039). The increase in C alleles of rs2094258 [hazard ratio (HR) = 1.19, 95% confidence interval (CI): 1.02-1.45, P = 0.037] were associated with the long-term survival of GC cases. Other risk factors for survival included tumor differentiation (HR = 4.51, 95%CI: 1.99-8.23, P < 0.001), lymphovascular invasion (HR = 1.97, 95%CI: 1.44-3.01, P < 0.001), and use of chemotherapy (HR = 0.81, 95%CI: 0.63-0.98, P = 0.041). CONCLUSION: The XPG rs2094258 polymorphism may be associated with overall survival in GC patients. Baishideng Publishing Group Inc 2019-09-14 2019-09-14 /pmc/articles/PMC6747292/ /pubmed/31558863 http://dx.doi.org/10.3748/wjg.v25.i34.5152 Text en ©The Author(s) 2019. Published by Baishideng Publishing Group Inc. All rights reserved. http://creativecommons.org/licenses/by-nc/4.0/ This article is an open-access article which was selected by an in-house editor and fully peer-reviewed by external reviewers. It is distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial.
spellingShingle Case Control Study
Wang, Xiao-Qin
Terry, Paul D
Li, Yang
Zhang, Yue
Kou, Wen-Jing
Wang, Ming-Xu
Association of XPG rs2094258 polymorphism with gastric cancer prognosis
title Association of XPG rs2094258 polymorphism with gastric cancer prognosis
title_full Association of XPG rs2094258 polymorphism with gastric cancer prognosis
title_fullStr Association of XPG rs2094258 polymorphism with gastric cancer prognosis
title_full_unstemmed Association of XPG rs2094258 polymorphism with gastric cancer prognosis
title_short Association of XPG rs2094258 polymorphism with gastric cancer prognosis
title_sort association of xpg rs2094258 polymorphism with gastric cancer prognosis
topic Case Control Study
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6747292/
https://www.ncbi.nlm.nih.gov/pubmed/31558863
http://dx.doi.org/10.3748/wjg.v25.i34.5152
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