Cargando…

Structure and Dynamics of Water at the Water–Air Interface Using First-Principles Molecular Dynamics Simulations. II. NonLocal vs Empirical van der Waals Corrections

[Image: see text] van der Waals (vdW) correction schemes have been recognized to be essential for an accurate description of liquid water in first-principles molecular dynamics simulation. The description of the structure and dynamics of water is governed by the type of the vdW corrections. So far,...

Descripción completa

Detalles Bibliográficos
Autores principales: Dodia, Mayank, Ohto, Tatsuhiko, Imoto, Sho, Nagata, Yuki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2019
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6750744/
https://www.ncbi.nlm.nih.gov/pubmed/31074989
http://dx.doi.org/10.1021/acs.jctc.9b00253
_version_ 1783452519994753024
author Dodia, Mayank
Ohto, Tatsuhiko
Imoto, Sho
Nagata, Yuki
author_facet Dodia, Mayank
Ohto, Tatsuhiko
Imoto, Sho
Nagata, Yuki
author_sort Dodia, Mayank
collection PubMed
description [Image: see text] van der Waals (vdW) correction schemes have been recognized to be essential for an accurate description of liquid water in first-principles molecular dynamics simulation. The description of the structure and dynamics of water is governed by the type of the vdW corrections. So far, two vdW correction schemes have been often used: empirical vdW corrections and nonlocal vdW corrections. In this paper, we assess the influence of the empirical vs nonlocal vdW correction schemes on the structure and dynamics of water at the water–air interface. Since the structure of water at the water–air interface is established by a delicate balance of hydrogen bond formation and breaking, the simulation at the water–air interface provides a unique platform to testify as to the heterogeneous interaction of water. We used the metrics [Ohto et al. J. Chem. Theory Comput., 2019, 15, 595−60230468702] which are directly connected with the sum-frequency generation spectroscopic measurement. We find that the overall performance of nonlocal vdW methods is either similar or worse compared to the empirical vdW methods. We also investigated the performance of the optB88-DRSLL functional, which showed slightly less accuracy than the revPBE-D3 method. We conclude that the revPBE-D3 method shows the best performance for describing the interfacial water.
format Online
Article
Text
id pubmed-6750744
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher American Chemical Society
record_format MEDLINE/PubMed
spelling pubmed-67507442019-09-19 Structure and Dynamics of Water at the Water–Air Interface Using First-Principles Molecular Dynamics Simulations. II. NonLocal vs Empirical van der Waals Corrections Dodia, Mayank Ohto, Tatsuhiko Imoto, Sho Nagata, Yuki J Chem Theory Comput [Image: see text] van der Waals (vdW) correction schemes have been recognized to be essential for an accurate description of liquid water in first-principles molecular dynamics simulation. The description of the structure and dynamics of water is governed by the type of the vdW corrections. So far, two vdW correction schemes have been often used: empirical vdW corrections and nonlocal vdW corrections. In this paper, we assess the influence of the empirical vs nonlocal vdW correction schemes on the structure and dynamics of water at the water–air interface. Since the structure of water at the water–air interface is established by a delicate balance of hydrogen bond formation and breaking, the simulation at the water–air interface provides a unique platform to testify as to the heterogeneous interaction of water. We used the metrics [Ohto et al. J. Chem. Theory Comput., 2019, 15, 595−60230468702] which are directly connected with the sum-frequency generation spectroscopic measurement. We find that the overall performance of nonlocal vdW methods is either similar or worse compared to the empirical vdW methods. We also investigated the performance of the optB88-DRSLL functional, which showed slightly less accuracy than the revPBE-D3 method. We conclude that the revPBE-D3 method shows the best performance for describing the interfacial water. American Chemical Society 2019-05-10 2019-06-11 /pmc/articles/PMC6750744/ /pubmed/31074989 http://dx.doi.org/10.1021/acs.jctc.9b00253 Text en Copyright © 2019 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited.
spellingShingle Dodia, Mayank
Ohto, Tatsuhiko
Imoto, Sho
Nagata, Yuki
Structure and Dynamics of Water at the Water–Air Interface Using First-Principles Molecular Dynamics Simulations. II. NonLocal vs Empirical van der Waals Corrections
title Structure and Dynamics of Water at the Water–Air Interface Using First-Principles Molecular Dynamics Simulations. II. NonLocal vs Empirical van der Waals Corrections
title_full Structure and Dynamics of Water at the Water–Air Interface Using First-Principles Molecular Dynamics Simulations. II. NonLocal vs Empirical van der Waals Corrections
title_fullStr Structure and Dynamics of Water at the Water–Air Interface Using First-Principles Molecular Dynamics Simulations. II. NonLocal vs Empirical van der Waals Corrections
title_full_unstemmed Structure and Dynamics of Water at the Water–Air Interface Using First-Principles Molecular Dynamics Simulations. II. NonLocal vs Empirical van der Waals Corrections
title_short Structure and Dynamics of Water at the Water–Air Interface Using First-Principles Molecular Dynamics Simulations. II. NonLocal vs Empirical van der Waals Corrections
title_sort structure and dynamics of water at the water–air interface using first-principles molecular dynamics simulations. ii. nonlocal vs empirical van der waals corrections
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6750744/
https://www.ncbi.nlm.nih.gov/pubmed/31074989
http://dx.doi.org/10.1021/acs.jctc.9b00253
work_keys_str_mv AT dodiamayank structureanddynamicsofwateratthewaterairinterfaceusingfirstprinciplesmoleculardynamicssimulationsiinonlocalvsempiricalvanderwaalscorrections
AT ohtotatsuhiko structureanddynamicsofwateratthewaterairinterfaceusingfirstprinciplesmoleculardynamicssimulationsiinonlocalvsempiricalvanderwaalscorrections
AT imotosho structureanddynamicsofwateratthewaterairinterfaceusingfirstprinciplesmoleculardynamicssimulationsiinonlocalvsempiricalvanderwaalscorrections
AT nagatayuki structureanddynamicsofwateratthewaterairinterfaceusingfirstprinciplesmoleculardynamicssimulationsiinonlocalvsempiricalvanderwaalscorrections