Cargando…
Structure and Dynamics of Water at the Water–Air Interface Using First-Principles Molecular Dynamics Simulations. II. NonLocal vs Empirical van der Waals Corrections
[Image: see text] van der Waals (vdW) correction schemes have been recognized to be essential for an accurate description of liquid water in first-principles molecular dynamics simulation. The description of the structure and dynamics of water is governed by the type of the vdW corrections. So far,...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American
Chemical Society
2019
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6750744/ https://www.ncbi.nlm.nih.gov/pubmed/31074989 http://dx.doi.org/10.1021/acs.jctc.9b00253 |
_version_ | 1783452519994753024 |
---|---|
author | Dodia, Mayank Ohto, Tatsuhiko Imoto, Sho Nagata, Yuki |
author_facet | Dodia, Mayank Ohto, Tatsuhiko Imoto, Sho Nagata, Yuki |
author_sort | Dodia, Mayank |
collection | PubMed |
description | [Image: see text] van der Waals (vdW) correction schemes have been recognized to be essential for an accurate description of liquid water in first-principles molecular dynamics simulation. The description of the structure and dynamics of water is governed by the type of the vdW corrections. So far, two vdW correction schemes have been often used: empirical vdW corrections and nonlocal vdW corrections. In this paper, we assess the influence of the empirical vs nonlocal vdW correction schemes on the structure and dynamics of water at the water–air interface. Since the structure of water at the water–air interface is established by a delicate balance of hydrogen bond formation and breaking, the simulation at the water–air interface provides a unique platform to testify as to the heterogeneous interaction of water. We used the metrics [Ohto et al. J. Chem. Theory Comput., 2019, 15, 595−60230468702] which are directly connected with the sum-frequency generation spectroscopic measurement. We find that the overall performance of nonlocal vdW methods is either similar or worse compared to the empirical vdW methods. We also investigated the performance of the optB88-DRSLL functional, which showed slightly less accuracy than the revPBE-D3 method. We conclude that the revPBE-D3 method shows the best performance for describing the interfacial water. |
format | Online Article Text |
id | pubmed-6750744 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | American
Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-67507442019-09-19 Structure and Dynamics of Water at the Water–Air Interface Using First-Principles Molecular Dynamics Simulations. II. NonLocal vs Empirical van der Waals Corrections Dodia, Mayank Ohto, Tatsuhiko Imoto, Sho Nagata, Yuki J Chem Theory Comput [Image: see text] van der Waals (vdW) correction schemes have been recognized to be essential for an accurate description of liquid water in first-principles molecular dynamics simulation. The description of the structure and dynamics of water is governed by the type of the vdW corrections. So far, two vdW correction schemes have been often used: empirical vdW corrections and nonlocal vdW corrections. In this paper, we assess the influence of the empirical vs nonlocal vdW correction schemes on the structure and dynamics of water at the water–air interface. Since the structure of water at the water–air interface is established by a delicate balance of hydrogen bond formation and breaking, the simulation at the water–air interface provides a unique platform to testify as to the heterogeneous interaction of water. We used the metrics [Ohto et al. J. Chem. Theory Comput., 2019, 15, 595−60230468702] which are directly connected with the sum-frequency generation spectroscopic measurement. We find that the overall performance of nonlocal vdW methods is either similar or worse compared to the empirical vdW methods. We also investigated the performance of the optB88-DRSLL functional, which showed slightly less accuracy than the revPBE-D3 method. We conclude that the revPBE-D3 method shows the best performance for describing the interfacial water. American Chemical Society 2019-05-10 2019-06-11 /pmc/articles/PMC6750744/ /pubmed/31074989 http://dx.doi.org/10.1021/acs.jctc.9b00253 Text en Copyright © 2019 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited. |
spellingShingle | Dodia, Mayank Ohto, Tatsuhiko Imoto, Sho Nagata, Yuki Structure and Dynamics of Water at the Water–Air Interface Using First-Principles Molecular Dynamics Simulations. II. NonLocal vs Empirical van der Waals Corrections |
title | Structure and Dynamics of Water at the Water–Air
Interface Using First-Principles Molecular Dynamics Simulations. II.
NonLocal vs Empirical van der Waals Corrections |
title_full | Structure and Dynamics of Water at the Water–Air
Interface Using First-Principles Molecular Dynamics Simulations. II.
NonLocal vs Empirical van der Waals Corrections |
title_fullStr | Structure and Dynamics of Water at the Water–Air
Interface Using First-Principles Molecular Dynamics Simulations. II.
NonLocal vs Empirical van der Waals Corrections |
title_full_unstemmed | Structure and Dynamics of Water at the Water–Air
Interface Using First-Principles Molecular Dynamics Simulations. II.
NonLocal vs Empirical van der Waals Corrections |
title_short | Structure and Dynamics of Water at the Water–Air
Interface Using First-Principles Molecular Dynamics Simulations. II.
NonLocal vs Empirical van der Waals Corrections |
title_sort | structure and dynamics of water at the water–air
interface using first-principles molecular dynamics simulations. ii.
nonlocal vs empirical van der waals corrections |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6750744/ https://www.ncbi.nlm.nih.gov/pubmed/31074989 http://dx.doi.org/10.1021/acs.jctc.9b00253 |
work_keys_str_mv | AT dodiamayank structureanddynamicsofwateratthewaterairinterfaceusingfirstprinciplesmoleculardynamicssimulationsiinonlocalvsempiricalvanderwaalscorrections AT ohtotatsuhiko structureanddynamicsofwateratthewaterairinterfaceusingfirstprinciplesmoleculardynamicssimulationsiinonlocalvsempiricalvanderwaalscorrections AT imotosho structureanddynamicsofwateratthewaterairinterfaceusingfirstprinciplesmoleculardynamicssimulationsiinonlocalvsempiricalvanderwaalscorrections AT nagatayuki structureanddynamicsofwateratthewaterairinterfaceusingfirstprinciplesmoleculardynamicssimulationsiinonlocalvsempiricalvanderwaalscorrections |