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Aquatic eDNA for monitoring French Guiana biodiversity
Abstract. BACKGROUND: Environmental DNA [eDNA] metabarcoding has recently emerged as a non-destructive alternative to traditional sampling for characterising species assemblages. NEW INFORMATION: We here provide a consistent dataset synthetising all eDNA sampling sites in French Guiana to date. Fiel...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Pensoft Publishers
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6751219/ https://www.ncbi.nlm.nih.gov/pubmed/31592221 http://dx.doi.org/10.3897/BDJ.7.e37518 |
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author | Murienne, Jérôme Cantera, Isabel Cerdan, Axel Cilleros, Kévin Decotte, Jean-Baptiste Dejean, Tony Vigouroux, Régis Brosse, Sébastien |
author_facet | Murienne, Jérôme Cantera, Isabel Cerdan, Axel Cilleros, Kévin Decotte, Jean-Baptiste Dejean, Tony Vigouroux, Régis Brosse, Sébastien |
author_sort | Murienne, Jérôme |
collection | PubMed |
description | Abstract. BACKGROUND: Environmental DNA [eDNA] metabarcoding has recently emerged as a non-destructive alternative to traditional sampling for characterising species assemblages. NEW INFORMATION: We here provide a consistent dataset synthetising all eDNA sampling sites in French Guiana to date. Field collections have been initiated in 2014 and have continued until 2019. This dataset is however a work in progress and will be updated after each collecting campaign. We also provide a taxon by site matrix for fishes presence / absence as inferred from eDNA. Our aim is to allow a transparent communication to the stakeholders and provide the foundation for a monitoring programme based on eDNA. The lastest version of the dataset is publicly and freely accessible through the CEBA geoportal (http://vmcebagn-dev.ird.fr) or through the French Guiana geographic portal (https://www.geoguyane.fr). |
format | Online Article Text |
id | pubmed-6751219 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Pensoft Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-67512192019-10-07 Aquatic eDNA for monitoring French Guiana biodiversity Murienne, Jérôme Cantera, Isabel Cerdan, Axel Cilleros, Kévin Decotte, Jean-Baptiste Dejean, Tony Vigouroux, Régis Brosse, Sébastien Biodivers Data J Data Paper (Biosciences) Abstract. BACKGROUND: Environmental DNA [eDNA] metabarcoding has recently emerged as a non-destructive alternative to traditional sampling for characterising species assemblages. NEW INFORMATION: We here provide a consistent dataset synthetising all eDNA sampling sites in French Guiana to date. Field collections have been initiated in 2014 and have continued until 2019. This dataset is however a work in progress and will be updated after each collecting campaign. We also provide a taxon by site matrix for fishes presence / absence as inferred from eDNA. Our aim is to allow a transparent communication to the stakeholders and provide the foundation for a monitoring programme based on eDNA. The lastest version of the dataset is publicly and freely accessible through the CEBA geoportal (http://vmcebagn-dev.ird.fr) or through the French Guiana geographic portal (https://www.geoguyane.fr). Pensoft Publishers 2019-09-11 /pmc/articles/PMC6751219/ /pubmed/31592221 http://dx.doi.org/10.3897/BDJ.7.e37518 Text en Jérôme Murienne, Isabel Cantera, Axel Cerdan, Kévin Cilleros, Jean-Baptiste Decotte, Tony Dejean, Régis Vigouroux, Sébastien Brosse http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Data Paper (Biosciences) Murienne, Jérôme Cantera, Isabel Cerdan, Axel Cilleros, Kévin Decotte, Jean-Baptiste Dejean, Tony Vigouroux, Régis Brosse, Sébastien Aquatic eDNA for monitoring French Guiana biodiversity |
title | Aquatic eDNA for monitoring French Guiana biodiversity |
title_full | Aquatic eDNA for monitoring French Guiana biodiversity |
title_fullStr | Aquatic eDNA for monitoring French Guiana biodiversity |
title_full_unstemmed | Aquatic eDNA for monitoring French Guiana biodiversity |
title_short | Aquatic eDNA for monitoring French Guiana biodiversity |
title_sort | aquatic edna for monitoring french guiana biodiversity |
topic | Data Paper (Biosciences) |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6751219/ https://www.ncbi.nlm.nih.gov/pubmed/31592221 http://dx.doi.org/10.3897/BDJ.7.e37518 |
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