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Circular RNA expression profile in the spinal cord of morphine tolerated rats and screen of putative key circRNAs
Morphine tolerance developed after repeated or continuous morphine treatment is a global health concern hindering the control of chronic pain. In our previous research, we have reported that the expression of lncRNAs and microRNAs have been greatly modified in the spinal cord of morphine tolerated r...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6751888/ https://www.ncbi.nlm.nih.gov/pubmed/31533844 http://dx.doi.org/10.1186/s13041-019-0498-4 |
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author | Weng, Yingqi Wu, Jing Li, Lin Shao, Jiali Li, Zhengyiqi Deng, Meiling Zou, Wangyuan |
author_facet | Weng, Yingqi Wu, Jing Li, Lin Shao, Jiali Li, Zhengyiqi Deng, Meiling Zou, Wangyuan |
author_sort | Weng, Yingqi |
collection | PubMed |
description | Morphine tolerance developed after repeated or continuous morphine treatment is a global health concern hindering the control of chronic pain. In our previous research, we have reported that the expression of lncRNAs and microRNAs have been greatly modified in the spinal cord of morphine tolerated rats, and the modulating role of miR-873a-5p, miR-219-5p and miR-365 have already been confirmed. However, whether circular RNAs, another essential kind of non-coding RNA, are involved in the pathogenesis of morphine tolerance is still beyond our knowledge. In this study, we conducted microarray analysis for circRNA profile and found a large number of circRNAs changed greatly in the spinal cord by morphine treatment. Among them, we selected nine circRNAs for validation, and seven circRNAs are confirmed. Gene Ontology/Kyoto Encyclopedia of Genes and Genomes (GO/KEGG) analysis were used for functional annotation. Besides, we confirmed the modified expression of seven circRNAs after validation by real-time PCR, selected 3 most prominently modulated ones among them and predicted their downstream miRNA-mRNA network and analyzed their putative function via circRNA-miRNA-mRNA pathway. Finally, we enrolled the differentially expressed mRNAs derived from the identical spinal cord, these validated circRNAs and their putative miRNA targets for ceRNA analysis and screened a promising circRNA-miRNA-mRNA pathway in the development of morphine tolerance. This study, for the first time, provided valuable information on circRNA profile and gave clues for further study on the circRNA mechanism of morphine tolerance. |
format | Online Article Text |
id | pubmed-6751888 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-67518882019-09-23 Circular RNA expression profile in the spinal cord of morphine tolerated rats and screen of putative key circRNAs Weng, Yingqi Wu, Jing Li, Lin Shao, Jiali Li, Zhengyiqi Deng, Meiling Zou, Wangyuan Mol Brain Research Morphine tolerance developed after repeated or continuous morphine treatment is a global health concern hindering the control of chronic pain. In our previous research, we have reported that the expression of lncRNAs and microRNAs have been greatly modified in the spinal cord of morphine tolerated rats, and the modulating role of miR-873a-5p, miR-219-5p and miR-365 have already been confirmed. However, whether circular RNAs, another essential kind of non-coding RNA, are involved in the pathogenesis of morphine tolerance is still beyond our knowledge. In this study, we conducted microarray analysis for circRNA profile and found a large number of circRNAs changed greatly in the spinal cord by morphine treatment. Among them, we selected nine circRNAs for validation, and seven circRNAs are confirmed. Gene Ontology/Kyoto Encyclopedia of Genes and Genomes (GO/KEGG) analysis were used for functional annotation. Besides, we confirmed the modified expression of seven circRNAs after validation by real-time PCR, selected 3 most prominently modulated ones among them and predicted their downstream miRNA-mRNA network and analyzed their putative function via circRNA-miRNA-mRNA pathway. Finally, we enrolled the differentially expressed mRNAs derived from the identical spinal cord, these validated circRNAs and their putative miRNA targets for ceRNA analysis and screened a promising circRNA-miRNA-mRNA pathway in the development of morphine tolerance. This study, for the first time, provided valuable information on circRNA profile and gave clues for further study on the circRNA mechanism of morphine tolerance. BioMed Central 2019-09-18 /pmc/articles/PMC6751888/ /pubmed/31533844 http://dx.doi.org/10.1186/s13041-019-0498-4 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Weng, Yingqi Wu, Jing Li, Lin Shao, Jiali Li, Zhengyiqi Deng, Meiling Zou, Wangyuan Circular RNA expression profile in the spinal cord of morphine tolerated rats and screen of putative key circRNAs |
title | Circular RNA expression profile in the spinal cord of morphine tolerated rats and screen of putative key circRNAs |
title_full | Circular RNA expression profile in the spinal cord of morphine tolerated rats and screen of putative key circRNAs |
title_fullStr | Circular RNA expression profile in the spinal cord of morphine tolerated rats and screen of putative key circRNAs |
title_full_unstemmed | Circular RNA expression profile in the spinal cord of morphine tolerated rats and screen of putative key circRNAs |
title_short | Circular RNA expression profile in the spinal cord of morphine tolerated rats and screen of putative key circRNAs |
title_sort | circular rna expression profile in the spinal cord of morphine tolerated rats and screen of putative key circrnas |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6751888/ https://www.ncbi.nlm.nih.gov/pubmed/31533844 http://dx.doi.org/10.1186/s13041-019-0498-4 |
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