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The spatial scale of dispersal revealed by admixture tracts

Evaluating species dispersal across the landscape is essential to design appropriate management and conservation actions. However, technical difficulties often preclude direct measures of individual movement, while indirect genetic approaches rely on assumptions that sometimes limit their applicatio...

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Autores principales: Duranton, Maud, Bonhomme, François, Gagnaire, Pierre‐Alexandre
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6752141/
https://www.ncbi.nlm.nih.gov/pubmed/31548854
http://dx.doi.org/10.1111/eva.12829
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author Duranton, Maud
Bonhomme, François
Gagnaire, Pierre‐Alexandre
author_facet Duranton, Maud
Bonhomme, François
Gagnaire, Pierre‐Alexandre
author_sort Duranton, Maud
collection PubMed
description Evaluating species dispersal across the landscape is essential to design appropriate management and conservation actions. However, technical difficulties often preclude direct measures of individual movement, while indirect genetic approaches rely on assumptions that sometimes limit their application. Here, we show that the temporal decay of admixture tracts lengths can be used to assess genetic connectivity within a population introgressed by foreign haplotypes. We present a proof‐of‐concept approach based on local ancestry inference in a high gene flow marine fish species, the European sea bass (Dicentrarchus labrax). Genetic admixture in the contact zone between Atlantic and Mediterranean sea bass lineages allows the introgression of Atlantic haplotype tracts within the Mediterranean Sea. Once introgressed, blocks of foreign ancestry are progressively eroded by recombination as they diffuse from the western to the eastern Mediterranean basin, providing a means to estimate dispersal. By comparing the length distributions of Atlantic tracts between two Mediterranean populations located at different distances from the contact zone, we estimated the average per‐generation dispersal distance within the Mediterranean lineage to less than 50 km. Using simulations, we showed that this approach is robust to a range of demographic histories and sample sizes. Our results thus support that the length of admixture tracts can be used together with a recombination clock to estimate genetic connectivity in species for which the neutral migration‐drift balance is not informative or simply does not exist.
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spelling pubmed-67521412019-09-23 The spatial scale of dispersal revealed by admixture tracts Duranton, Maud Bonhomme, François Gagnaire, Pierre‐Alexandre Evol Appl Original Articles Evaluating species dispersal across the landscape is essential to design appropriate management and conservation actions. However, technical difficulties often preclude direct measures of individual movement, while indirect genetic approaches rely on assumptions that sometimes limit their application. Here, we show that the temporal decay of admixture tracts lengths can be used to assess genetic connectivity within a population introgressed by foreign haplotypes. We present a proof‐of‐concept approach based on local ancestry inference in a high gene flow marine fish species, the European sea bass (Dicentrarchus labrax). Genetic admixture in the contact zone between Atlantic and Mediterranean sea bass lineages allows the introgression of Atlantic haplotype tracts within the Mediterranean Sea. Once introgressed, blocks of foreign ancestry are progressively eroded by recombination as they diffuse from the western to the eastern Mediterranean basin, providing a means to estimate dispersal. By comparing the length distributions of Atlantic tracts between two Mediterranean populations located at different distances from the contact zone, we estimated the average per‐generation dispersal distance within the Mediterranean lineage to less than 50 km. Using simulations, we showed that this approach is robust to a range of demographic histories and sample sizes. Our results thus support that the length of admixture tracts can be used together with a recombination clock to estimate genetic connectivity in species for which the neutral migration‐drift balance is not informative or simply does not exist. John Wiley and Sons Inc. 2019-06-27 /pmc/articles/PMC6752141/ /pubmed/31548854 http://dx.doi.org/10.1111/eva.12829 Text en © 2019 The Authors. Evolutionary Applications published by John Wiley & Sons Ltd This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Duranton, Maud
Bonhomme, François
Gagnaire, Pierre‐Alexandre
The spatial scale of dispersal revealed by admixture tracts
title The spatial scale of dispersal revealed by admixture tracts
title_full The spatial scale of dispersal revealed by admixture tracts
title_fullStr The spatial scale of dispersal revealed by admixture tracts
title_full_unstemmed The spatial scale of dispersal revealed by admixture tracts
title_short The spatial scale of dispersal revealed by admixture tracts
title_sort spatial scale of dispersal revealed by admixture tracts
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6752141/
https://www.ncbi.nlm.nih.gov/pubmed/31548854
http://dx.doi.org/10.1111/eva.12829
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