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The diversity and ecological roles of Penicillium in intertidal zones
Members of the genus Penicillium are commonly isolated from various terrestrial and marine environments, and play an important ecological role as a decomposer. To gain insight into the ecological role of Penicillium in intertidal zones, we investigated the Penicillium diversity and community structu...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6753150/ https://www.ncbi.nlm.nih.gov/pubmed/31537866 http://dx.doi.org/10.1038/s41598-019-49966-5 |
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author | Park, Myung Soo Oh, Seung-Yoon Fong, Jonathan J. Houbraken, Jos Lim, Young Woon |
author_facet | Park, Myung Soo Oh, Seung-Yoon Fong, Jonathan J. Houbraken, Jos Lim, Young Woon |
author_sort | Park, Myung Soo |
collection | PubMed |
description | Members of the genus Penicillium are commonly isolated from various terrestrial and marine environments, and play an important ecological role as a decomposer. To gain insight into the ecological role of Penicillium in intertidal zones, we investigated the Penicillium diversity and community structure using a culture-dependent technique and a culture independent metagenomic approach using ITS (ITS-NGS) and partial β-tubulin (BenA-NGS) as targets. The obtained isolates were tested for halotolerance, enzyme activity, and polycyclic aromatic hydrocarbons (PAHs) degradation. A total of 96 Penicillium species were identified from the investigated intertidal zones. Although the BenA-NGS method was efficient for detecting Penicillium, some species were only detected using conventional isolation and/or the ITS-NGS method. The Penicillium community displayed a significant degree of variation relative to season (summer and winter) and seaside (western and southern coast). Many Penicillium species isolated in this study exhibited cellulase and protease activity, and/or degradation of PAHs. These findings support the important role of Penicillium in the intertidal zone for nutrient recycling and pollutant degradation. |
format | Online Article Text |
id | pubmed-6753150 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-67531502019-10-01 The diversity and ecological roles of Penicillium in intertidal zones Park, Myung Soo Oh, Seung-Yoon Fong, Jonathan J. Houbraken, Jos Lim, Young Woon Sci Rep Article Members of the genus Penicillium are commonly isolated from various terrestrial and marine environments, and play an important ecological role as a decomposer. To gain insight into the ecological role of Penicillium in intertidal zones, we investigated the Penicillium diversity and community structure using a culture-dependent technique and a culture independent metagenomic approach using ITS (ITS-NGS) and partial β-tubulin (BenA-NGS) as targets. The obtained isolates were tested for halotolerance, enzyme activity, and polycyclic aromatic hydrocarbons (PAHs) degradation. A total of 96 Penicillium species were identified from the investigated intertidal zones. Although the BenA-NGS method was efficient for detecting Penicillium, some species were only detected using conventional isolation and/or the ITS-NGS method. The Penicillium community displayed a significant degree of variation relative to season (summer and winter) and seaside (western and southern coast). Many Penicillium species isolated in this study exhibited cellulase and protease activity, and/or degradation of PAHs. These findings support the important role of Penicillium in the intertidal zone for nutrient recycling and pollutant degradation. Nature Publishing Group UK 2019-09-19 /pmc/articles/PMC6753150/ /pubmed/31537866 http://dx.doi.org/10.1038/s41598-019-49966-5 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Park, Myung Soo Oh, Seung-Yoon Fong, Jonathan J. Houbraken, Jos Lim, Young Woon The diversity and ecological roles of Penicillium in intertidal zones |
title | The diversity and ecological roles of Penicillium in intertidal zones |
title_full | The diversity and ecological roles of Penicillium in intertidal zones |
title_fullStr | The diversity and ecological roles of Penicillium in intertidal zones |
title_full_unstemmed | The diversity and ecological roles of Penicillium in intertidal zones |
title_short | The diversity and ecological roles of Penicillium in intertidal zones |
title_sort | diversity and ecological roles of penicillium in intertidal zones |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6753150/ https://www.ncbi.nlm.nih.gov/pubmed/31537866 http://dx.doi.org/10.1038/s41598-019-49966-5 |
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