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Air pollution, particulate matter composition and methylation-based biologic age

BACKGROUND: Epigenetic age, as defined by DNA methylation, may be influenced by air pollution exposure. OBJECTIVE: To evaluate the relationship between NO(2), particulate matter (PM), PM components and accelerated epigenetic age. METHODS: In a sample of non-Hispanic white women living in the contigu...

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Autores principales: White, Alexandra J., Kresovich, Jacob K., Keller, Joshua P., Xu, Zongli, Kaufman, Joel D., Weinberg, Clarice R., Taylor, Jack A., Sandler, Dale P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6754788/
https://www.ncbi.nlm.nih.gov/pubmed/31387022
http://dx.doi.org/10.1016/j.envint.2019.105071
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author White, Alexandra J.
Kresovich, Jacob K.
Keller, Joshua P.
Xu, Zongli
Kaufman, Joel D.
Weinberg, Clarice R.
Taylor, Jack A.
Sandler, Dale P.
author_facet White, Alexandra J.
Kresovich, Jacob K.
Keller, Joshua P.
Xu, Zongli
Kaufman, Joel D.
Weinberg, Clarice R.
Taylor, Jack A.
Sandler, Dale P.
author_sort White, Alexandra J.
collection PubMed
description BACKGROUND: Epigenetic age, as defined by DNA methylation, may be influenced by air pollution exposure. OBJECTIVE: To evaluate the relationship between NO(2), particulate matter (PM), PM components and accelerated epigenetic age. METHODS: In a sample of non-Hispanic white women living in the contiguous U.S. (n = 2747), we estimated residential exposure to PM(2.5), PM(10) and NO(2) using a model incorporating land-use regression and kriging. Predictive k-means was used to assign participants to clusters representing different PM(2.5) component profiles. We measured DNA methylation (DNAm) in blood using the Illumina's Infinium HumanMethylation450 BeadChip and calculated DNAm age using the Hannum, Horvath and Levine epigenetic clocks. Age acceleration was defined based on residuals after regressing DNAm age on chronological age. We estimated associations between interquartile range (IQR) increases in pollutants and age acceleration using linear regression. For PM(2.5), we stratified by cluster membership. We examined epigenome-wide associations using robust linear regression models corrected with false discovery rate q-values. RESULTS: NO(2) was inversely associated with age acceleration using the Hannum clock (β = −0.24, 95% Cl: − 0.47, −0.02). No associations were observed for PM(10). For PM(2.5), the association with age acceleration varied by PM(2.5) component cluster. For example, with the Levine clock, an IQR increase in PM(2.5) was associated with an over 6-year age acceleration in a cluster that has relatively high fractions of crustal elements relative to overall PM(2.5) (β = 6.57, 95% CI: 2.68, 10.47), and an almost 2-year acceleration in a cluster characterized by relatively low sulfur fractions (β = 1.88, 95% CI: 0.51, 3.25). In a cluster distinguished by lower relative nitrate concentrations, PM(2.5) was inversely associated with age acceleration (β = −1.33, 95% CI: −2.43, −0.23). Across the epigenome, NO(2) was associated with methylation at 2 CpG sites. CONCLUSION: Air pollution was associated with epigenetic age, a marker of mortality and disease risk, among certain PM(2.5) component profiles.
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spelling pubmed-67547882020-11-01 Air pollution, particulate matter composition and methylation-based biologic age White, Alexandra J. Kresovich, Jacob K. Keller, Joshua P. Xu, Zongli Kaufman, Joel D. Weinberg, Clarice R. Taylor, Jack A. Sandler, Dale P. Environ Int Article BACKGROUND: Epigenetic age, as defined by DNA methylation, may be influenced by air pollution exposure. OBJECTIVE: To evaluate the relationship between NO(2), particulate matter (PM), PM components and accelerated epigenetic age. METHODS: In a sample of non-Hispanic white women living in the contiguous U.S. (n = 2747), we estimated residential exposure to PM(2.5), PM(10) and NO(2) using a model incorporating land-use regression and kriging. Predictive k-means was used to assign participants to clusters representing different PM(2.5) component profiles. We measured DNA methylation (DNAm) in blood using the Illumina's Infinium HumanMethylation450 BeadChip and calculated DNAm age using the Hannum, Horvath and Levine epigenetic clocks. Age acceleration was defined based on residuals after regressing DNAm age on chronological age. We estimated associations between interquartile range (IQR) increases in pollutants and age acceleration using linear regression. For PM(2.5), we stratified by cluster membership. We examined epigenome-wide associations using robust linear regression models corrected with false discovery rate q-values. RESULTS: NO(2) was inversely associated with age acceleration using the Hannum clock (β = −0.24, 95% Cl: − 0.47, −0.02). No associations were observed for PM(10). For PM(2.5), the association with age acceleration varied by PM(2.5) component cluster. For example, with the Levine clock, an IQR increase in PM(2.5) was associated with an over 6-year age acceleration in a cluster that has relatively high fractions of crustal elements relative to overall PM(2.5) (β = 6.57, 95% CI: 2.68, 10.47), and an almost 2-year acceleration in a cluster characterized by relatively low sulfur fractions (β = 1.88, 95% CI: 0.51, 3.25). In a cluster distinguished by lower relative nitrate concentrations, PM(2.5) was inversely associated with age acceleration (β = −1.33, 95% CI: −2.43, −0.23). Across the epigenome, NO(2) was associated with methylation at 2 CpG sites. CONCLUSION: Air pollution was associated with epigenetic age, a marker of mortality and disease risk, among certain PM(2.5) component profiles. 2019-08-03 2019-11 /pmc/articles/PMC6754788/ /pubmed/31387022 http://dx.doi.org/10.1016/j.envint.2019.105071 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/BY-NC-ND/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) ).
spellingShingle Article
White, Alexandra J.
Kresovich, Jacob K.
Keller, Joshua P.
Xu, Zongli
Kaufman, Joel D.
Weinberg, Clarice R.
Taylor, Jack A.
Sandler, Dale P.
Air pollution, particulate matter composition and methylation-based biologic age
title Air pollution, particulate matter composition and methylation-based biologic age
title_full Air pollution, particulate matter composition and methylation-based biologic age
title_fullStr Air pollution, particulate matter composition and methylation-based biologic age
title_full_unstemmed Air pollution, particulate matter composition and methylation-based biologic age
title_short Air pollution, particulate matter composition and methylation-based biologic age
title_sort air pollution, particulate matter composition and methylation-based biologic age
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6754788/
https://www.ncbi.nlm.nih.gov/pubmed/31387022
http://dx.doi.org/10.1016/j.envint.2019.105071
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