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Adenovirus major core protein condenses DNA in clusters and bundles, modulating genome release and capsid internal pressure

Some viruses package dsDNA together with large amounts of positively charged proteins, thought to help condense the genome inside the capsid with no evidence. Further, this role is not clear because these viruses have typically lower packing fractions than viruses encapsidating naked dsDNA. In addit...

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Autores principales: Martín-González, Natalia, Hernando-Pérez, Mercedes, Condezo, Gabriela N, Pérez-Illana, Marta, Šiber, Antonio, Reguera, David, Ostapchuk, Philomena, Hearing, Patrick, San Martín, Carmen, de Pablo, Pedro J
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6755088/
https://www.ncbi.nlm.nih.gov/pubmed/31396624
http://dx.doi.org/10.1093/nar/gkz687
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author Martín-González, Natalia
Hernando-Pérez, Mercedes
Condezo, Gabriela N
Pérez-Illana, Marta
Šiber, Antonio
Reguera, David
Ostapchuk, Philomena
Hearing, Patrick
San Martín, Carmen
de Pablo, Pedro J
author_facet Martín-González, Natalia
Hernando-Pérez, Mercedes
Condezo, Gabriela N
Pérez-Illana, Marta
Šiber, Antonio
Reguera, David
Ostapchuk, Philomena
Hearing, Patrick
San Martín, Carmen
de Pablo, Pedro J
author_sort Martín-González, Natalia
collection PubMed
description Some viruses package dsDNA together with large amounts of positively charged proteins, thought to help condense the genome inside the capsid with no evidence. Further, this role is not clear because these viruses have typically lower packing fractions than viruses encapsidating naked dsDNA. In addition, it has recently been shown that the major adenovirus condensing protein (polypeptide VII) is dispensable for genome encapsidation. Here, we study the morphology and mechanics of adenovirus particles with (Ad5-wt) and without (Ad5-VII-) protein VII. Ad5-VII- particles are stiffer than Ad5-wt, but DNA-counterions revert this difference, indicating that VII screens repulsive DNA-DNA interactions. Consequently, its absence results in increased internal pressure. The core is slightly more ordered in the absence of VII and diffuses faster out of Ad5-VII– than Ad5-wt fractured particles. In Ad5-wt unpacked cores, dsDNA associates in bundles interspersed with VII-DNA clusters. These results indicate that protein VII condenses the adenovirus genome by combining direct clustering and promotion of bridging by other core proteins. This condensation modulates the virion internal pressure and DNA release from disrupted particles, which could be crucial to keep the genome protected inside the semi-disrupted capsid while traveling to the nuclear pore.
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spelling pubmed-67550882019-09-26 Adenovirus major core protein condenses DNA in clusters and bundles, modulating genome release and capsid internal pressure Martín-González, Natalia Hernando-Pérez, Mercedes Condezo, Gabriela N Pérez-Illana, Marta Šiber, Antonio Reguera, David Ostapchuk, Philomena Hearing, Patrick San Martín, Carmen de Pablo, Pedro J Nucleic Acids Res Molecular Biology Some viruses package dsDNA together with large amounts of positively charged proteins, thought to help condense the genome inside the capsid with no evidence. Further, this role is not clear because these viruses have typically lower packing fractions than viruses encapsidating naked dsDNA. In addition, it has recently been shown that the major adenovirus condensing protein (polypeptide VII) is dispensable for genome encapsidation. Here, we study the morphology and mechanics of adenovirus particles with (Ad5-wt) and without (Ad5-VII-) protein VII. Ad5-VII- particles are stiffer than Ad5-wt, but DNA-counterions revert this difference, indicating that VII screens repulsive DNA-DNA interactions. Consequently, its absence results in increased internal pressure. The core is slightly more ordered in the absence of VII and diffuses faster out of Ad5-VII– than Ad5-wt fractured particles. In Ad5-wt unpacked cores, dsDNA associates in bundles interspersed with VII-DNA clusters. These results indicate that protein VII condenses the adenovirus genome by combining direct clustering and promotion of bridging by other core proteins. This condensation modulates the virion internal pressure and DNA release from disrupted particles, which could be crucial to keep the genome protected inside the semi-disrupted capsid while traveling to the nuclear pore. Oxford University Press 2019-09-26 2019-08-09 /pmc/articles/PMC6755088/ /pubmed/31396624 http://dx.doi.org/10.1093/nar/gkz687 Text en © The Author(s) 2019. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Molecular Biology
Martín-González, Natalia
Hernando-Pérez, Mercedes
Condezo, Gabriela N
Pérez-Illana, Marta
Šiber, Antonio
Reguera, David
Ostapchuk, Philomena
Hearing, Patrick
San Martín, Carmen
de Pablo, Pedro J
Adenovirus major core protein condenses DNA in clusters and bundles, modulating genome release and capsid internal pressure
title Adenovirus major core protein condenses DNA in clusters and bundles, modulating genome release and capsid internal pressure
title_full Adenovirus major core protein condenses DNA in clusters and bundles, modulating genome release and capsid internal pressure
title_fullStr Adenovirus major core protein condenses DNA in clusters and bundles, modulating genome release and capsid internal pressure
title_full_unstemmed Adenovirus major core protein condenses DNA in clusters and bundles, modulating genome release and capsid internal pressure
title_short Adenovirus major core protein condenses DNA in clusters and bundles, modulating genome release and capsid internal pressure
title_sort adenovirus major core protein condenses dna in clusters and bundles, modulating genome release and capsid internal pressure
topic Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6755088/
https://www.ncbi.nlm.nih.gov/pubmed/31396624
http://dx.doi.org/10.1093/nar/gkz687
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