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An 8-gene signature predicts the prognosis of cervical cancer following radiotherapy

Gene expression and DNA methylation levels affect the outcomes of patients with cancer. The present study aimed to establish a multigene risk model for predicting the outcomes of patients with cervical cancer (CerC) treated with or without radiotherapy. RNA sequencing training data with matched DNA...

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Autores principales: Xie, Fei, Dong, Dan, Du, Na, Guo, Liang, Ni, Weihua, Yuan, Hongyan, Zhang, Nannan, Jie, Jiang, Liu, Guomu, Tai, Guixiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: D.A. Spandidos 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6755236/
https://www.ncbi.nlm.nih.gov/pubmed/31432147
http://dx.doi.org/10.3892/mmr.2019.10535
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author Xie, Fei
Dong, Dan
Du, Na
Guo, Liang
Ni, Weihua
Yuan, Hongyan
Zhang, Nannan
Jie, Jiang
Liu, Guomu
Tai, Guixiang
author_facet Xie, Fei
Dong, Dan
Du, Na
Guo, Liang
Ni, Weihua
Yuan, Hongyan
Zhang, Nannan
Jie, Jiang
Liu, Guomu
Tai, Guixiang
author_sort Xie, Fei
collection PubMed
description Gene expression and DNA methylation levels affect the outcomes of patients with cancer. The present study aimed to establish a multigene risk model for predicting the outcomes of patients with cervical cancer (CerC) treated with or without radiotherapy. RNA sequencing training data with matched DNA methylation profiles were downloaded from The Cancer Genome Atlas database. Patients were divided into radiotherapy and non-radiotherapy groups according to the treatment strategy. Differently expressed and methylated genes between the two groups were identified, and 8 prognostic genes were identified using Cox regression analysis. The optimized risk model based on the 8-gene signature was defined using the Cox's proportional hazards model. Kaplan-Meier survival analysis indicated that patients with higher risk scores exhibited poorer survival compared with patients with lower risk scores (log-rank test, P=3.22×10(−7)). Validation using the GSE44001 gene set demonstrated that patients in the high-risk group exhibited a shorter survival time comprared with the low-risk group (log-rank test, P=3.01×10(−3)). The area under the receiver operating characteristic curve values for the training and validation sets were 0.951 and 0.929, respectively. Cox regression analyses indicated that recurrence and risk status were risk factors for poor outcomes in patients with CerC treated with or without radiotherapy. The present study defined that the 8-gene signature was an independent risk factor for the prognosis of patients with CerC. The 8-gene prognostic model had predictive power for CerC prognosis.
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spelling pubmed-67552362019-09-25 An 8-gene signature predicts the prognosis of cervical cancer following radiotherapy Xie, Fei Dong, Dan Du, Na Guo, Liang Ni, Weihua Yuan, Hongyan Zhang, Nannan Jie, Jiang Liu, Guomu Tai, Guixiang Mol Med Rep Articles Gene expression and DNA methylation levels affect the outcomes of patients with cancer. The present study aimed to establish a multigene risk model for predicting the outcomes of patients with cervical cancer (CerC) treated with or without radiotherapy. RNA sequencing training data with matched DNA methylation profiles were downloaded from The Cancer Genome Atlas database. Patients were divided into radiotherapy and non-radiotherapy groups according to the treatment strategy. Differently expressed and methylated genes between the two groups were identified, and 8 prognostic genes were identified using Cox regression analysis. The optimized risk model based on the 8-gene signature was defined using the Cox's proportional hazards model. Kaplan-Meier survival analysis indicated that patients with higher risk scores exhibited poorer survival compared with patients with lower risk scores (log-rank test, P=3.22×10(−7)). Validation using the GSE44001 gene set demonstrated that patients in the high-risk group exhibited a shorter survival time comprared with the low-risk group (log-rank test, P=3.01×10(−3)). The area under the receiver operating characteristic curve values for the training and validation sets were 0.951 and 0.929, respectively. Cox regression analyses indicated that recurrence and risk status were risk factors for poor outcomes in patients with CerC treated with or without radiotherapy. The present study defined that the 8-gene signature was an independent risk factor for the prognosis of patients with CerC. The 8-gene prognostic model had predictive power for CerC prognosis. D.A. Spandidos 2019-10 2019-07-29 /pmc/articles/PMC6755236/ /pubmed/31432147 http://dx.doi.org/10.3892/mmr.2019.10535 Text en Copyright: © Xie et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.
spellingShingle Articles
Xie, Fei
Dong, Dan
Du, Na
Guo, Liang
Ni, Weihua
Yuan, Hongyan
Zhang, Nannan
Jie, Jiang
Liu, Guomu
Tai, Guixiang
An 8-gene signature predicts the prognosis of cervical cancer following radiotherapy
title An 8-gene signature predicts the prognosis of cervical cancer following radiotherapy
title_full An 8-gene signature predicts the prognosis of cervical cancer following radiotherapy
title_fullStr An 8-gene signature predicts the prognosis of cervical cancer following radiotherapy
title_full_unstemmed An 8-gene signature predicts the prognosis of cervical cancer following radiotherapy
title_short An 8-gene signature predicts the prognosis of cervical cancer following radiotherapy
title_sort 8-gene signature predicts the prognosis of cervical cancer following radiotherapy
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6755236/
https://www.ncbi.nlm.nih.gov/pubmed/31432147
http://dx.doi.org/10.3892/mmr.2019.10535
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