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RNA editing in the forefront of epitranscriptomics and human health

Post-transcriptional modifications have been recently expanded with the addition of RNA editing, which is predominantly mediated by adenosine and cytidine deaminases acting on DNA and RNA. Here, we review the full spectrum of physiological processes in which these modifiers are implicated, among dif...

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Autores principales: Christofi, Theodoulakis, Zaravinos, Apostolos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6757416/
https://www.ncbi.nlm.nih.gov/pubmed/31547885
http://dx.doi.org/10.1186/s12967-019-2071-4
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author Christofi, Theodoulakis
Zaravinos, Apostolos
author_facet Christofi, Theodoulakis
Zaravinos, Apostolos
author_sort Christofi, Theodoulakis
collection PubMed
description Post-transcriptional modifications have been recently expanded with the addition of RNA editing, which is predominantly mediated by adenosine and cytidine deaminases acting on DNA and RNA. Here, we review the full spectrum of physiological processes in which these modifiers are implicated, among different organisms. Adenosine to inosine (A-to-I) editors, members of the ADAR and ADAT protein families are important regulators of alternative splicing and transcriptional control. On the other hand, cytidine to uridine (C-to-U) editors, members of the AID/APOBEC family, are heavily implicated in innate and adaptive immunity with important roles in antibody diversification and antiviral response. Physiologically, these enzymes are present in the nucleus and/or the cytoplasm, where they modify various RNA molecules, including miRNAs, tRNAs apart from mRNAs, whereas DNA editing is also possible by some of them. The expansion of next generation sequencing technologies provided a wealth of data regarding such modifications. RNA editing has been implicated in various disorders including cancer, and neurological diseases of the brain or the central nervous system. It is also related to cancer heterogeneity and the onset of carcinogenesis. Response to treatment can also be affected by the RNA editing status where drug efficacy is significantly compromised. Studying RNA editing events can pave the way to the identification of new disease biomarkers, and provide a more personalised therapy to various diseases.
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spelling pubmed-67574162019-09-30 RNA editing in the forefront of epitranscriptomics and human health Christofi, Theodoulakis Zaravinos, Apostolos J Transl Med Review Post-transcriptional modifications have been recently expanded with the addition of RNA editing, which is predominantly mediated by adenosine and cytidine deaminases acting on DNA and RNA. Here, we review the full spectrum of physiological processes in which these modifiers are implicated, among different organisms. Adenosine to inosine (A-to-I) editors, members of the ADAR and ADAT protein families are important regulators of alternative splicing and transcriptional control. On the other hand, cytidine to uridine (C-to-U) editors, members of the AID/APOBEC family, are heavily implicated in innate and adaptive immunity with important roles in antibody diversification and antiviral response. Physiologically, these enzymes are present in the nucleus and/or the cytoplasm, where they modify various RNA molecules, including miRNAs, tRNAs apart from mRNAs, whereas DNA editing is also possible by some of them. The expansion of next generation sequencing technologies provided a wealth of data regarding such modifications. RNA editing has been implicated in various disorders including cancer, and neurological diseases of the brain or the central nervous system. It is also related to cancer heterogeneity and the onset of carcinogenesis. Response to treatment can also be affected by the RNA editing status where drug efficacy is significantly compromised. Studying RNA editing events can pave the way to the identification of new disease biomarkers, and provide a more personalised therapy to various diseases. BioMed Central 2019-09-23 /pmc/articles/PMC6757416/ /pubmed/31547885 http://dx.doi.org/10.1186/s12967-019-2071-4 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Review
Christofi, Theodoulakis
Zaravinos, Apostolos
RNA editing in the forefront of epitranscriptomics and human health
title RNA editing in the forefront of epitranscriptomics and human health
title_full RNA editing in the forefront of epitranscriptomics and human health
title_fullStr RNA editing in the forefront of epitranscriptomics and human health
title_full_unstemmed RNA editing in the forefront of epitranscriptomics and human health
title_short RNA editing in the forefront of epitranscriptomics and human health
title_sort rna editing in the forefront of epitranscriptomics and human health
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6757416/
https://www.ncbi.nlm.nih.gov/pubmed/31547885
http://dx.doi.org/10.1186/s12967-019-2071-4
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