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Bayesian ages for pollen records since the last glaciation in North America
Terrestrial pollen records are abundant and widely distributed, making them an excellent proxy for past vegetation dynamics. Age-depth models relate pollen samples from sediment cores to a depositional age based on the relationship between sample depth and available chronological controls. Large-sca...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6760146/ https://www.ncbi.nlm.nih.gov/pubmed/31551416 http://dx.doi.org/10.1038/s41597-019-0182-7 |
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author | Wang, Yue Goring, Simon J. McGuire, Jenny L. |
author_facet | Wang, Yue Goring, Simon J. McGuire, Jenny L. |
author_sort | Wang, Yue |
collection | PubMed |
description | Terrestrial pollen records are abundant and widely distributed, making them an excellent proxy for past vegetation dynamics. Age-depth models relate pollen samples from sediment cores to a depositional age based on the relationship between sample depth and available chronological controls. Large-scale synthesis of pollen data benefit from consistent treatment of age uncertainties. Generating new age models helps to reduce potential artifacts from legacy age models that used outdated techniques. Traditional age-depth models, often applied for comparative purposes, infer ages by fitting a curve between dated samples. Bacon, based on Bayesian theory, simulates the sediment deposition process, accounting for both variable deposition rates and temporal/spatial autocorrelation of deposition from one sample to another within the core. Bacon provides robust uncertainty estimation across cores with different depositional processes. We use Bacon to estimate pollen sample ages from 554 North American sediment cores. This dataset standardizes age-depth estimations, supporting future large spatial-temporal studies and removes a challenging, computationally-intensive step for scientists interested in questions that integrate across multiple cores. |
format | Online Article Text |
id | pubmed-6760146 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-67601462019-10-03 Bayesian ages for pollen records since the last glaciation in North America Wang, Yue Goring, Simon J. McGuire, Jenny L. Sci Data Data Descriptor Terrestrial pollen records are abundant and widely distributed, making them an excellent proxy for past vegetation dynamics. Age-depth models relate pollen samples from sediment cores to a depositional age based on the relationship between sample depth and available chronological controls. Large-scale synthesis of pollen data benefit from consistent treatment of age uncertainties. Generating new age models helps to reduce potential artifacts from legacy age models that used outdated techniques. Traditional age-depth models, often applied for comparative purposes, infer ages by fitting a curve between dated samples. Bacon, based on Bayesian theory, simulates the sediment deposition process, accounting for both variable deposition rates and temporal/spatial autocorrelation of deposition from one sample to another within the core. Bacon provides robust uncertainty estimation across cores with different depositional processes. We use Bacon to estimate pollen sample ages from 554 North American sediment cores. This dataset standardizes age-depth estimations, supporting future large spatial-temporal studies and removes a challenging, computationally-intensive step for scientists interested in questions that integrate across multiple cores. Nature Publishing Group UK 2019-09-24 /pmc/articles/PMC6760146/ /pubmed/31551416 http://dx.doi.org/10.1038/s41597-019-0182-7 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files associated with this article. |
spellingShingle | Data Descriptor Wang, Yue Goring, Simon J. McGuire, Jenny L. Bayesian ages for pollen records since the last glaciation in North America |
title | Bayesian ages for pollen records since the last glaciation in North America |
title_full | Bayesian ages for pollen records since the last glaciation in North America |
title_fullStr | Bayesian ages for pollen records since the last glaciation in North America |
title_full_unstemmed | Bayesian ages for pollen records since the last glaciation in North America |
title_short | Bayesian ages for pollen records since the last glaciation in North America |
title_sort | bayesian ages for pollen records since the last glaciation in north america |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6760146/ https://www.ncbi.nlm.nih.gov/pubmed/31551416 http://dx.doi.org/10.1038/s41597-019-0182-7 |
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