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A de novo evolved gene in the house mouse regulates female pregnancy cycles

The de novo emergence of new genes has been well documented through genomic analyses. However, a functional analysis, especially of very young protein-coding genes, is still largely lacking. Here, we identify a set of house mouse-specific protein-coding genes and assess their translation by ribosome...

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Autores principales: Xie, Chen, Bekpen, Cemalettin, Künzel, Sven, Keshavarz, Maryam, Krebs-Wheaton, Rebecca, Skrabar, Neva, Ullrich, Kristian Karsten, Tautz, Diethard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6760900/
https://www.ncbi.nlm.nih.gov/pubmed/31436535
http://dx.doi.org/10.7554/eLife.44392
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author Xie, Chen
Bekpen, Cemalettin
Künzel, Sven
Keshavarz, Maryam
Krebs-Wheaton, Rebecca
Skrabar, Neva
Ullrich, Kristian Karsten
Tautz, Diethard
author_facet Xie, Chen
Bekpen, Cemalettin
Künzel, Sven
Keshavarz, Maryam
Krebs-Wheaton, Rebecca
Skrabar, Neva
Ullrich, Kristian Karsten
Tautz, Diethard
author_sort Xie, Chen
collection PubMed
description The de novo emergence of new genes has been well documented through genomic analyses. However, a functional analysis, especially of very young protein-coding genes, is still largely lacking. Here, we identify a set of house mouse-specific protein-coding genes and assess their translation by ribosome profiling and mass spectrometry data. We functionally analyze one of them, Gm13030, which is specifically expressed in females in the oviduct. The interruption of the reading frame affects the transcriptional network in the oviducts at a specific stage of the estrous cycle. This includes the upregulation of Dcpp genes, which are known to stimulate the growth of preimplantation embryos. As a consequence, knockout females have their second litters after shorter times and have a higher infanticide rate. Given that Gm13030 shows no signs of positive selection, our findings support the hypothesis that a de novo evolved gene can directly adopt a function without much sequence adaptation.
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spelling pubmed-67609002019-09-26 A de novo evolved gene in the house mouse regulates female pregnancy cycles Xie, Chen Bekpen, Cemalettin Künzel, Sven Keshavarz, Maryam Krebs-Wheaton, Rebecca Skrabar, Neva Ullrich, Kristian Karsten Tautz, Diethard eLife Evolutionary Biology The de novo emergence of new genes has been well documented through genomic analyses. However, a functional analysis, especially of very young protein-coding genes, is still largely lacking. Here, we identify a set of house mouse-specific protein-coding genes and assess their translation by ribosome profiling and mass spectrometry data. We functionally analyze one of them, Gm13030, which is specifically expressed in females in the oviduct. The interruption of the reading frame affects the transcriptional network in the oviducts at a specific stage of the estrous cycle. This includes the upregulation of Dcpp genes, which are known to stimulate the growth of preimplantation embryos. As a consequence, knockout females have their second litters after shorter times and have a higher infanticide rate. Given that Gm13030 shows no signs of positive selection, our findings support the hypothesis that a de novo evolved gene can directly adopt a function without much sequence adaptation. eLife Sciences Publications, Ltd 2019-08-22 /pmc/articles/PMC6760900/ /pubmed/31436535 http://dx.doi.org/10.7554/eLife.44392 Text en © 2019, Xie et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Evolutionary Biology
Xie, Chen
Bekpen, Cemalettin
Künzel, Sven
Keshavarz, Maryam
Krebs-Wheaton, Rebecca
Skrabar, Neva
Ullrich, Kristian Karsten
Tautz, Diethard
A de novo evolved gene in the house mouse regulates female pregnancy cycles
title A de novo evolved gene in the house mouse regulates female pregnancy cycles
title_full A de novo evolved gene in the house mouse regulates female pregnancy cycles
title_fullStr A de novo evolved gene in the house mouse regulates female pregnancy cycles
title_full_unstemmed A de novo evolved gene in the house mouse regulates female pregnancy cycles
title_short A de novo evolved gene in the house mouse regulates female pregnancy cycles
title_sort de novo evolved gene in the house mouse regulates female pregnancy cycles
topic Evolutionary Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6760900/
https://www.ncbi.nlm.nih.gov/pubmed/31436535
http://dx.doi.org/10.7554/eLife.44392
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