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Janibacter species with evidence of genomic polymorphism isolated from resected heart valve in a patient with aortic stenosis

The authors report isolation and identification of two strains of bacteria belonging to the genus Janibacter from a human patient with aortic stenosis from a rural area of the country of Georgia. The microorganisms were isolated from aortic heart valve. Two isolates with slightly distinct colony mor...

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Autores principales: Malania, Lile, Bai, Ying, Khanipov, Kamil, Tsereteli, Marika, Metreveli, Mikheil, Tsereteli, David, Sidamonidze, Ketevan, Imnadze, Paata, Fofanov, Yuriy, Kosoy, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PAGEPress Publications, Pavia, Italy 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6761468/
https://www.ncbi.nlm.nih.gov/pubmed/31579471
http://dx.doi.org/10.4081/idr.2019.8132
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author Malania, Lile
Bai, Ying
Khanipov, Kamil
Tsereteli, Marika
Metreveli, Mikheil
Tsereteli, David
Sidamonidze, Ketevan
Imnadze, Paata
Fofanov, Yuriy
Kosoy, Michael
author_facet Malania, Lile
Bai, Ying
Khanipov, Kamil
Tsereteli, Marika
Metreveli, Mikheil
Tsereteli, David
Sidamonidze, Ketevan
Imnadze, Paata
Fofanov, Yuriy
Kosoy, Michael
author_sort Malania, Lile
collection PubMed
description The authors report isolation and identification of two strains of bacteria belonging to the genus Janibacter from a human patient with aortic stenosis from a rural area of the country of Georgia. The microorganisms were isolated from aortic heart valve. Two isolates with slightly distinct colony morphologies were harvested after sub-culturing from an original agar plate. Preliminary identification of the isolates is based on amplification and sequencing of a fragment of 16SrRNA. Whole genome sequencing was performed using the Illumina MiSeq instrument. Both isolates were identified as undistinguished strains of the genus Janibacter. Characterization of whole genome sequences of each culture has revealed a 15% difference in gene profile between the cultures and confirmed that both strains belong to the genus Janibacter with the closest match to J. terrae. Genomic comparison of cultures of Janibacter obtained from human cases and from environmental sources presents a promising direction for evaluating a role of these bacteria as human pathogens.
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spelling pubmed-67614682019-10-02 Janibacter species with evidence of genomic polymorphism isolated from resected heart valve in a patient with aortic stenosis Malania, Lile Bai, Ying Khanipov, Kamil Tsereteli, Marika Metreveli, Mikheil Tsereteli, David Sidamonidze, Ketevan Imnadze, Paata Fofanov, Yuriy Kosoy, Michael Infect Dis Rep Article The authors report isolation and identification of two strains of bacteria belonging to the genus Janibacter from a human patient with aortic stenosis from a rural area of the country of Georgia. The microorganisms were isolated from aortic heart valve. Two isolates with slightly distinct colony morphologies were harvested after sub-culturing from an original agar plate. Preliminary identification of the isolates is based on amplification and sequencing of a fragment of 16SrRNA. Whole genome sequencing was performed using the Illumina MiSeq instrument. Both isolates were identified as undistinguished strains of the genus Janibacter. Characterization of whole genome sequences of each culture has revealed a 15% difference in gene profile between the cultures and confirmed that both strains belong to the genus Janibacter with the closest match to J. terrae. Genomic comparison of cultures of Janibacter obtained from human cases and from environmental sources presents a promising direction for evaluating a role of these bacteria as human pathogens. PAGEPress Publications, Pavia, Italy 2019-09-18 /pmc/articles/PMC6761468/ /pubmed/31579471 http://dx.doi.org/10.4081/idr.2019.8132 Text en ©Copyright: the Author(s), 2019 http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Article
Malania, Lile
Bai, Ying
Khanipov, Kamil
Tsereteli, Marika
Metreveli, Mikheil
Tsereteli, David
Sidamonidze, Ketevan
Imnadze, Paata
Fofanov, Yuriy
Kosoy, Michael
Janibacter species with evidence of genomic polymorphism isolated from resected heart valve in a patient with aortic stenosis
title Janibacter species with evidence of genomic polymorphism isolated from resected heart valve in a patient with aortic stenosis
title_full Janibacter species with evidence of genomic polymorphism isolated from resected heart valve in a patient with aortic stenosis
title_fullStr Janibacter species with evidence of genomic polymorphism isolated from resected heart valve in a patient with aortic stenosis
title_full_unstemmed Janibacter species with evidence of genomic polymorphism isolated from resected heart valve in a patient with aortic stenosis
title_short Janibacter species with evidence of genomic polymorphism isolated from resected heart valve in a patient with aortic stenosis
title_sort janibacter species with evidence of genomic polymorphism isolated from resected heart valve in a patient with aortic stenosis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6761468/
https://www.ncbi.nlm.nih.gov/pubmed/31579471
http://dx.doi.org/10.4081/idr.2019.8132
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