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Protein quantification and visualization via ultraviolet-dependent labeling with 2,2,2-trichloroethanol
The incorporation of 2,2,2-trichloroethanol in polyacrylamide gels allows for fluorescent visualization of proteins following electrophoresis. Ultraviolet-light exposure, in the presence of this trichlorinated compound, results in a covalent modification of the tryptophan indole ring that shifts the...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6763483/ https://www.ncbi.nlm.nih.gov/pubmed/31558752 http://dx.doi.org/10.1038/s41598-019-50385-9 |
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author | Chopra, Anand Willmore, William G. Biggar, Kyle K. |
author_facet | Chopra, Anand Willmore, William G. Biggar, Kyle K. |
author_sort | Chopra, Anand |
collection | PubMed |
description | The incorporation of 2,2,2-trichloroethanol in polyacrylamide gels allows for fluorescent visualization of proteins following electrophoresis. Ultraviolet-light exposure, in the presence of this trichlorinated compound, results in a covalent modification of the tryptophan indole ring that shifts the fluorescent emission into the visible range. Based on this principle, we used 2,2,2-trichloroethanol to develop a microplate format protein quantification assay based on the fluorescent signal generated by modified proteins. We also demonstrated a specific fluorescent emission of 2,2,2-trichloroethanol-labeled protein at 450 nm, with a 310 nm excitation, resulting from modification of both tryptophan and tyrosine residues. Following optimization, this protein quantification assay displayed superior sensitivity when compared to UV absorbance at 280 nm (A280), and enabled quantification beyond the linear range permitted by the Bradford method. This 100 μL assay displayed a sensitivity of 10.5 μg in a range up to at least 200 μg. Furthermore, we extended the utility of this method through the development of a 20 μL low-volume assay, with a sensitivity of 8.7 μg tested up to 100 μg, which enabled visualization of proteins following SDS-PAGE. Collectively, these results demonstrate the utility of 2,2,2-trichloroethanol-based protein quantification and demonstrates the protein visualization in polyacrylamide gels based on 2,2,2-trichloroethanol-labeling pre-electrophoresis. |
format | Online Article Text |
id | pubmed-6763483 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-67634832019-10-02 Protein quantification and visualization via ultraviolet-dependent labeling with 2,2,2-trichloroethanol Chopra, Anand Willmore, William G. Biggar, Kyle K. Sci Rep Article The incorporation of 2,2,2-trichloroethanol in polyacrylamide gels allows for fluorescent visualization of proteins following electrophoresis. Ultraviolet-light exposure, in the presence of this trichlorinated compound, results in a covalent modification of the tryptophan indole ring that shifts the fluorescent emission into the visible range. Based on this principle, we used 2,2,2-trichloroethanol to develop a microplate format protein quantification assay based on the fluorescent signal generated by modified proteins. We also demonstrated a specific fluorescent emission of 2,2,2-trichloroethanol-labeled protein at 450 nm, with a 310 nm excitation, resulting from modification of both tryptophan and tyrosine residues. Following optimization, this protein quantification assay displayed superior sensitivity when compared to UV absorbance at 280 nm (A280), and enabled quantification beyond the linear range permitted by the Bradford method. This 100 μL assay displayed a sensitivity of 10.5 μg in a range up to at least 200 μg. Furthermore, we extended the utility of this method through the development of a 20 μL low-volume assay, with a sensitivity of 8.7 μg tested up to 100 μg, which enabled visualization of proteins following SDS-PAGE. Collectively, these results demonstrate the utility of 2,2,2-trichloroethanol-based protein quantification and demonstrates the protein visualization in polyacrylamide gels based on 2,2,2-trichloroethanol-labeling pre-electrophoresis. Nature Publishing Group UK 2019-09-26 /pmc/articles/PMC6763483/ /pubmed/31558752 http://dx.doi.org/10.1038/s41598-019-50385-9 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Chopra, Anand Willmore, William G. Biggar, Kyle K. Protein quantification and visualization via ultraviolet-dependent labeling with 2,2,2-trichloroethanol |
title | Protein quantification and visualization via ultraviolet-dependent labeling with 2,2,2-trichloroethanol |
title_full | Protein quantification and visualization via ultraviolet-dependent labeling with 2,2,2-trichloroethanol |
title_fullStr | Protein quantification and visualization via ultraviolet-dependent labeling with 2,2,2-trichloroethanol |
title_full_unstemmed | Protein quantification and visualization via ultraviolet-dependent labeling with 2,2,2-trichloroethanol |
title_short | Protein quantification and visualization via ultraviolet-dependent labeling with 2,2,2-trichloroethanol |
title_sort | protein quantification and visualization via ultraviolet-dependent labeling with 2,2,2-trichloroethanol |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6763483/ https://www.ncbi.nlm.nih.gov/pubmed/31558752 http://dx.doi.org/10.1038/s41598-019-50385-9 |
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