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Multicenter Study Demonstrates Standardization Requirements for Mold Identification by MALDI-TOF MS
OBJECTIVES: Rapid and accurate mold identification is critical for guiding therapy for mold infections. MALDI-TOF MS has been widely adopted for bacterial and yeast identification; however, few clinical laboratories have applied this technology for routine mold identification due to limited database...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6764242/ https://www.ncbi.nlm.nih.gov/pubmed/31616388 http://dx.doi.org/10.3389/fmicb.2019.02098 |
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author | Lau, Anna F. Walchak, Robert C. Miller, Heather B. Slechta, E. Susan Kamboj, Kamal Riebe, Katherine Robertson, Amy E. Gilbreath, Jeremy J. Mitchell, Kaitlin F. Wallace, Meghan A. Bryson, Alexandra L. Balada-Llasat, Joan-Miquel Bulman, Amanda Buchan, Blake W. Burnham, Carey-Ann D. Butler-Wu, Susan Desai, Uma Doern, Christopher D. Hanson, Kimberly E. Henderson, Christina M. Kostrzewa, Markus Ledeboer, Nathan A. Maier, Thomas Pancholi, Preeti Schuetz, Audrey N. Shi, Gongyi Wengenack, Nancy L. Zhang, Sean X. Zelazny, Adrian M. Frank, Karen M. |
author_facet | Lau, Anna F. Walchak, Robert C. Miller, Heather B. Slechta, E. Susan Kamboj, Kamal Riebe, Katherine Robertson, Amy E. Gilbreath, Jeremy J. Mitchell, Kaitlin F. Wallace, Meghan A. Bryson, Alexandra L. Balada-Llasat, Joan-Miquel Bulman, Amanda Buchan, Blake W. Burnham, Carey-Ann D. Butler-Wu, Susan Desai, Uma Doern, Christopher D. Hanson, Kimberly E. Henderson, Christina M. Kostrzewa, Markus Ledeboer, Nathan A. Maier, Thomas Pancholi, Preeti Schuetz, Audrey N. Shi, Gongyi Wengenack, Nancy L. Zhang, Sean X. Zelazny, Adrian M. Frank, Karen M. |
author_sort | Lau, Anna F. |
collection | PubMed |
description | OBJECTIVES: Rapid and accurate mold identification is critical for guiding therapy for mold infections. MALDI-TOF MS has been widely adopted for bacterial and yeast identification; however, few clinical laboratories have applied this technology for routine mold identification due to limited database availability and lack of standardized processes. Here, we evaluated the versatility of the NIH Mold Database in a multicenter evaluation. METHODS: The NIH Mold Database was evaluated by eight US academic centers using a solid media extraction method and a challenge set of 80 clinical mold isolates. Multiple instrument parameters important for spectra optimization were evaluated, leading to the development of two specialized acquisition programs (NIH method and the Alternate-B method). RESULTS: A wide range in performance (33–77%) was initially observed across the eight centers when routine spectral acquisition parameters were applied. Use of the NIH or the Alternate-B specialized acquisition programs, which are different than those used routinely for bacterial and yeast spectral acquisition (MBT_AutoX), in combination with optimized instrument maintenance, improved performance, illustrating that acquisition parameters may be one of the key limiting variable in achieving successful performance. CONCLUSION: Successful mold identification using the NIH Database for MALDI-TOF MS on Biotyper systems was demonstrated across multiple institutions for the first time following identification of critical program parameters combined with instrument optimization. This significantly advances our potential to implement MALDI-TOF MS for mold identification across many institutions. Because instrument variability is inevitable, development of an instrument performance standard specific for mold spectral acquisition is suggested to improve reproducibility across instruments. |
format | Online Article Text |
id | pubmed-6764242 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-67642422019-10-15 Multicenter Study Demonstrates Standardization Requirements for Mold Identification by MALDI-TOF MS Lau, Anna F. Walchak, Robert C. Miller, Heather B. Slechta, E. Susan Kamboj, Kamal Riebe, Katherine Robertson, Amy E. Gilbreath, Jeremy J. Mitchell, Kaitlin F. Wallace, Meghan A. Bryson, Alexandra L. Balada-Llasat, Joan-Miquel Bulman, Amanda Buchan, Blake W. Burnham, Carey-Ann D. Butler-Wu, Susan Desai, Uma Doern, Christopher D. Hanson, Kimberly E. Henderson, Christina M. Kostrzewa, Markus Ledeboer, Nathan A. Maier, Thomas Pancholi, Preeti Schuetz, Audrey N. Shi, Gongyi Wengenack, Nancy L. Zhang, Sean X. Zelazny, Adrian M. Frank, Karen M. Front Microbiol Microbiology OBJECTIVES: Rapid and accurate mold identification is critical for guiding therapy for mold infections. MALDI-TOF MS has been widely adopted for bacterial and yeast identification; however, few clinical laboratories have applied this technology for routine mold identification due to limited database availability and lack of standardized processes. Here, we evaluated the versatility of the NIH Mold Database in a multicenter evaluation. METHODS: The NIH Mold Database was evaluated by eight US academic centers using a solid media extraction method and a challenge set of 80 clinical mold isolates. Multiple instrument parameters important for spectra optimization were evaluated, leading to the development of two specialized acquisition programs (NIH method and the Alternate-B method). RESULTS: A wide range in performance (33–77%) was initially observed across the eight centers when routine spectral acquisition parameters were applied. Use of the NIH or the Alternate-B specialized acquisition programs, which are different than those used routinely for bacterial and yeast spectral acquisition (MBT_AutoX), in combination with optimized instrument maintenance, improved performance, illustrating that acquisition parameters may be one of the key limiting variable in achieving successful performance. CONCLUSION: Successful mold identification using the NIH Database for MALDI-TOF MS on Biotyper systems was demonstrated across multiple institutions for the first time following identification of critical program parameters combined with instrument optimization. This significantly advances our potential to implement MALDI-TOF MS for mold identification across many institutions. Because instrument variability is inevitable, development of an instrument performance standard specific for mold spectral acquisition is suggested to improve reproducibility across instruments. Frontiers Media S.A. 2019-09-20 /pmc/articles/PMC6764242/ /pubmed/31616388 http://dx.doi.org/10.3389/fmicb.2019.02098 Text en Copyright © 2019 Lau, Walchak, Miller, Slechta, Kamboj, Riebe, Robertson, Gilbreath, Mitchell, Wallace, Bryson, Balada-Llasat, Bulman, Buchan, Burnham, Butler-Wu, Desai, Doern, Hanson, Henderson, Kostrzewa, Ledeboer, Maier, Pancholi, Schuetz, Shi, Wengenack, Zhang, Zelazny and Frank. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Lau, Anna F. Walchak, Robert C. Miller, Heather B. Slechta, E. Susan Kamboj, Kamal Riebe, Katherine Robertson, Amy E. Gilbreath, Jeremy J. Mitchell, Kaitlin F. Wallace, Meghan A. Bryson, Alexandra L. Balada-Llasat, Joan-Miquel Bulman, Amanda Buchan, Blake W. Burnham, Carey-Ann D. Butler-Wu, Susan Desai, Uma Doern, Christopher D. Hanson, Kimberly E. Henderson, Christina M. Kostrzewa, Markus Ledeboer, Nathan A. Maier, Thomas Pancholi, Preeti Schuetz, Audrey N. Shi, Gongyi Wengenack, Nancy L. Zhang, Sean X. Zelazny, Adrian M. Frank, Karen M. Multicenter Study Demonstrates Standardization Requirements for Mold Identification by MALDI-TOF MS |
title | Multicenter Study Demonstrates Standardization Requirements for Mold Identification by MALDI-TOF MS |
title_full | Multicenter Study Demonstrates Standardization Requirements for Mold Identification by MALDI-TOF MS |
title_fullStr | Multicenter Study Demonstrates Standardization Requirements for Mold Identification by MALDI-TOF MS |
title_full_unstemmed | Multicenter Study Demonstrates Standardization Requirements for Mold Identification by MALDI-TOF MS |
title_short | Multicenter Study Demonstrates Standardization Requirements for Mold Identification by MALDI-TOF MS |
title_sort | multicenter study demonstrates standardization requirements for mold identification by maldi-tof ms |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6764242/ https://www.ncbi.nlm.nih.gov/pubmed/31616388 http://dx.doi.org/10.3389/fmicb.2019.02098 |
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