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G Protein γ subunit 7 loss contributes to progression of clear cell renal cell carcinoma
Clear cell renal cell carcinoma (ccRCC) is a common urinary neoplasm, looking for useful candidates to establish scientific foundation for the therapy of ccRCC is urgent. We downloaded genomic profiles of GSE781, GSE6244, GSE53757, and GSE66271 from the Gene Expression Omnibus (GEO) database. GEO2R...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6767067/ https://www.ncbi.nlm.nih.gov/pubmed/30945310 http://dx.doi.org/10.1002/jcp.28597 |
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author | Xu, Shan Zhang, Haibao Liu, Tianjie Chen, Yule He, Dalin Li, Lei |
author_facet | Xu, Shan Zhang, Haibao Liu, Tianjie Chen, Yule He, Dalin Li, Lei |
author_sort | Xu, Shan |
collection | PubMed |
description | Clear cell renal cell carcinoma (ccRCC) is a common urinary neoplasm, looking for useful candidates to establish scientific foundation for the therapy of ccRCC is urgent. We downloaded genomic profiles of GSE781, GSE6244, GSE53757, and GSE66271 from the Gene Expression Omnibus (GEO) database. GEO2R was used to analyze the derivative genes, while hub genes were screened by protein‐protein interactions and cytoscape. Further, overall survival, gene methylation, gene mutation, and gene expression were all analyzed using bioinformatics tools. Colony formation and cell‐cycle assay were used to detect the biological function of GNG7 in vitro. We found that GNG7 was downregulated in ccRCC tissues and negatively associated with overall survival in ccRCC patients. We also found that promoter methylation and frequent gene mutation were responsible for GNG7 gene suppression. GNG7 low expression was related to upregulation of enhancer of zeste homolog 2 and downregulation of disabled homolog 2‐interacting protein. Further, Gene Set Enrichment Analysis results showed that mTOR1, E2F, G2M, and MYC pathways were all significantly altered in response to GNG7 low expression. In vitro, A498 and 786‐O cells in which GNG7 expression was silenced, exhibited a lower G1 phase when compared to the negative control cells. Taken together, our findings suggest that GNG7 is a tumor suppressor gene in ccRCC progression and represents a novel candidate for ccRCC treatment. |
format | Online Article Text |
id | pubmed-6767067 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-67670672019-10-01 G Protein γ subunit 7 loss contributes to progression of clear cell renal cell carcinoma Xu, Shan Zhang, Haibao Liu, Tianjie Chen, Yule He, Dalin Li, Lei J Cell Physiol Original Research Articles Clear cell renal cell carcinoma (ccRCC) is a common urinary neoplasm, looking for useful candidates to establish scientific foundation for the therapy of ccRCC is urgent. We downloaded genomic profiles of GSE781, GSE6244, GSE53757, and GSE66271 from the Gene Expression Omnibus (GEO) database. GEO2R was used to analyze the derivative genes, while hub genes were screened by protein‐protein interactions and cytoscape. Further, overall survival, gene methylation, gene mutation, and gene expression were all analyzed using bioinformatics tools. Colony formation and cell‐cycle assay were used to detect the biological function of GNG7 in vitro. We found that GNG7 was downregulated in ccRCC tissues and negatively associated with overall survival in ccRCC patients. We also found that promoter methylation and frequent gene mutation were responsible for GNG7 gene suppression. GNG7 low expression was related to upregulation of enhancer of zeste homolog 2 and downregulation of disabled homolog 2‐interacting protein. Further, Gene Set Enrichment Analysis results showed that mTOR1, E2F, G2M, and MYC pathways were all significantly altered in response to GNG7 low expression. In vitro, A498 and 786‐O cells in which GNG7 expression was silenced, exhibited a lower G1 phase when compared to the negative control cells. Taken together, our findings suggest that GNG7 is a tumor suppressor gene in ccRCC progression and represents a novel candidate for ccRCC treatment. John Wiley and Sons Inc. 2019-04-03 2019-11 /pmc/articles/PMC6767067/ /pubmed/30945310 http://dx.doi.org/10.1002/jcp.28597 Text en © 2019 The Authors. Journal of Cellular Physiology Published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Research Articles Xu, Shan Zhang, Haibao Liu, Tianjie Chen, Yule He, Dalin Li, Lei G Protein γ subunit 7 loss contributes to progression of clear cell renal cell carcinoma |
title | G Protein γ subunit 7 loss contributes to progression of clear cell renal cell carcinoma |
title_full | G Protein γ subunit 7 loss contributes to progression of clear cell renal cell carcinoma |
title_fullStr | G Protein γ subunit 7 loss contributes to progression of clear cell renal cell carcinoma |
title_full_unstemmed | G Protein γ subunit 7 loss contributes to progression of clear cell renal cell carcinoma |
title_short | G Protein γ subunit 7 loss contributes to progression of clear cell renal cell carcinoma |
title_sort | g protein γ subunit 7 loss contributes to progression of clear cell renal cell carcinoma |
topic | Original Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6767067/ https://www.ncbi.nlm.nih.gov/pubmed/30945310 http://dx.doi.org/10.1002/jcp.28597 |
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